Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM10204B04.5 |
| Conread position: | 392-576 |
| Cow position: | chr7:57142680-57142868 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 411-567 |
| Cow position: | chr7:40193001-40192842 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 415-576 |
| Cow position: | chr7:59713958-59713799 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 417-571 |
| Cow position: | chr7:25914246-25914401 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 57, 16 |
| Conread position: | 422-576 |
| Cow position: | chr7:57311855-57311698 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 49 |
| Conread position: | 426-576 |
| Cow position: | chr7:12754916-12755073 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 433-537 |
| Cow position: | chr7:10896307-10896408 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 433-576 |
| Cow position: | chr7:26195577-26195722 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 437-576 |
| Cow position: | chr7:37445091-37444947 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 37, 105 |
| Conread position: | 440-575 |
| Cow position: | chr7:41728165-41728027 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 120 |
| Conread position: | 440-575 |
| Cow position: | chr7:59246174-59246039 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:3133945-3134086 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 83 |
| Conread position: | 440-576 |
| Cow position: | chr7:5221073-5220933 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 440-576 |
| Cow position: | chr7:19399458-19399594 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:22802502-22802640 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:23256640-23256772 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:27387753-27387893 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 440-576 |
| Cow position: | chr7:40261728-40261864 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:43234221-43234362 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:50255858-50255721 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 440-576 |
| Cow position: | chr7:53005568-53005431 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 440-576 |
| Cow position: | chr7:66206813-66206672 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 34, 99 |
| Conread position: | 441-576 |
| Cow position: | chr7:25684827-25684962 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-576 |
| Cow position: | chr7:25857253-25857389 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 446-562 |
| Cow position: | chr7:46103737-46103621 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 94 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 96, 88 |
| Conread position: | 446-571 |
| Cow position: | chr7:31224197-31224321 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 97 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 451-576 |
| Cow position: | chr7:61681427-61681553 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 451-576 |
| Cow position: | chr7:67111705-67111831 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 457-571 |
| Cow position: | chr7:45956131-45956016 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 457-576 |
| Cow position: | chr7:14044174-14044055 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 466-576 |
| Cow position: | chr7:48443359-48443469 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 467-576 |
| Cow position: | chr7:40140252-40140144 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 468-567 |
| Cow position: | chr7:3748737-3748836 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 82 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.