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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10225B12.5
        

               
Conread position:
               
114-404
               

               
Cow position:
               
chr18:16997050-16997348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 5
               

               
Conread position:
               
120-310
               

               
Cow position:
               
chr18:10861630-10861436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 135
               

               
Conread position:
               
121-471
               

               
Cow position:
               
chr18:55498870-55499232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 104
               

               
Conread position:
               
122-497
               

               
Cow position:
               
chr18:12273461-12273839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
19, 136
               

               
Conread position:
               
123-475
               

               
Cow position:
               
chr18:2592356-2591994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
146, 8
               

               
Conread position:
               
124-344
               

               
Cow position:
               
chr18:6610047-6609832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
125-389
               

               
Cow position:
               
chr18:36458745-36459008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
38, 122
               

               
Conread position:
               
127-371
               

               
Cow position:
               
chr18:4182372-4182129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
212, 43
               

               
Conread position:
               
128-492
               

               
Cow position:
               
chr18:10575925-10576286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
172, 45
               

               
Conread position:
               
130-309
               

               
Cow position:
               
chr18:35537416-35537238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
131-290
               

               
Cow position:
               
chr18:18868567-18868728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
131-294
               

               
Cow position:
               
chr18:47868279-47868442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
89, 118
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr18:18369543-18369378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-306
               

               
Cow position:
               
chr18:47314470-47314291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
131-307
               

               
Cow position:
               
chr18:33606448-33606621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 117
               

               
Conread position:
               
131-310
               

               
Cow position:
               
chr18:14815518-14815349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
131-314
               

               
Cow position:
               
chr18:219152-219337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
131-324
               

               
Cow position:
               
chr18:27637030-27637220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 70
               

               
Conread position:
               
131-338
               

               
Cow position:
               
chr18:7947205-7947411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
35, 137
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr18:13359884-13360113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
210, 44
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr18:25282733-25282486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
211, 42
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr18:19896636-19896374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
214, 115
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr18:48828962-48828698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
117, 180
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr18:21102954-21102681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr18:22214301-22214585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
128, 67
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr18:39434647-39434930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
210, 41
               

               
Conread position:
               
131-420
               

               
Cow position:
               
chr18:47835646-47835938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
204, 105
               

               
Conread position:
               
131-461
               

               
Cow position:
               
chr18:37382274-37381939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
210, 160
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr18:39662598-39662943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
210, 107
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr18:46048581-46048916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
210, 23
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr18:3209533-3209882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr18:1144370-1144026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr18:12023815-12023473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 39
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr18:20271200-20270845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
182, 28
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr18:43283938-43283590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 51
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr18:39623618-39623977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
34, 60
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr18:40759035-40759397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
210, 23
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr18:46453055-46452706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
183, 39
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr18:50382078-50382428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
202, 38
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr18:54572473-54572114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
182, 117
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr18:18962017-18961655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
109, 83
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr18:22790251-22789910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 16
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr18:16227385-16227742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
210, 61
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr18:3211691-3212065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 123
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr18:7965055-7965418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
220, 29
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr18:14586652-14586293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
34, 121
               

               
Conread position:
               
131-499
               

               
Cow position:
               
chr18:26355210-26354852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr18:4496068-4495692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr18:56181639-56181259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
179, 26
               

               
Conread position:
               
131-508
               

               
Cow position:
               
chr18:22121061-22120685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr18:7950937-7951326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
206, 38
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr18:19849936-19849569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
131-526
               

               
Cow position:
               
chr18:29371688-29372088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
209, 72
               

               
Conread position:
               
132-298
               

               
Cow position:
               
chr18:24945988-24945824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
30, 78
               

               
Conread position:
               
132-336
               

               
Cow position:
               
chr18:267995-267800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
132-339
               

               
Cow position:
               
chr18:36297212-36296991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
132-486
               

               
Cow position:
               
chr18:12118019-12117676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
202, 39
               

               
Conread position:
               
132-493
               

               
Cow position:
               
chr18:10322625-10322979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 99
               

               
Conread position:
               
132-500
               

               
Cow position:
               
chr18:7415208-7414843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
132-508
               

               
Cow position:
               
chr18:55552790-55553171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 107
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr18:11166801-11166961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr18:7970189-7970353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 77
               

               
Conread position:
               
133-310
               

               
Cow position:
               
chr18:2864177-2863997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
133-311
               

               
Cow position:
               
chr18:21205184-21205358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-338
               

               
Cow position:
               
chr18:6103275-6103076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr18:16686515-16686313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr18:33407436-33407639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
133-340
               

               
Cow position:
               
chr18:47812291-47812493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
133-400
               

               
Cow position:
               
chr18:33007882-33008156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
133-407
               

               
Cow position:
               
chr18:56159282-56159556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
208, 109
               

               
Conread position:
               
133-408
               

               
Cow position:
               
chr18:52635263-52634975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
29, 272
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr18:25647430-25647148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
206, 42
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr18:36230898-36230628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
201, 33
               

               
Conread position:
               
133-414
               

               
Cow position:
               
chr18:21192595-21192307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 29
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr18:28658088-28657778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 38
               

               
Conread position:
               
133-465
               

               
Cow position:
               
chr18:45104619-45104273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
208, 32
               

               
Conread position:
               
133-468
               

               
Cow position:
               
chr18:6881526-6881199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
205, 29
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr18:3158781-3158421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
57, 38
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr18:9365738-9366084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
173, 40
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr18:9974502-9974168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
219, 37
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr18:26938807-26939134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr18:32883128-32883454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
200, 37
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr18:4884689-4884356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
200, 40
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr18:37002455-37002800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
133-474
               

               
Cow position:
               
chr18:29356805-29356468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
213, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:1399530-1399186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
190, 40
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:11691586-11691240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 39
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:12242098-12242443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:38985513-38985857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
162, 40
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:42479766-42479414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:45904072-45903730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr18:47511820-47512161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr18:37023731-37023361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr18:21195516-21195170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
183, 37
               

               
Conread position:
               
133-488
               

               
Cow position:
               
chr18:10904671-10905026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
133-491
               

               
Cow position:
               
chr18:17391155-17390804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
133-492
               

               
Cow position:
               
chr18:1954768-1954400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 37
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr18:29648607-29648964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr18:39875437-39875059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
133-494
               

               
Cow position:
               
chr18:10977385-10977031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
133-495
               

               
Cow position:
               
chr18:51691642-51691276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
208, 60
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr18:42432272-42431908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
167, 40
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr18:18592298-18592651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
133-506
               

               
Cow position:
               
chr18:48713371-48713736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-515
               

               
Cow position:
               
chr18:43555703-43555303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
204, 27
               

               
Conread position:
               
134-305
               

               
Cow position:
               
chr18:15340624-15340456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 41
               

               
Conread position:
               
134-369
               

               
Cow position:
               
chr18:38344628-38344863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
188, 36
               

               
Conread position:
               
134-379
               

               
Cow position:
               
chr18:13507916-13507672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr18:19273275-19273001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
134-421
               

               
Cow position:
               
chr18:48453517-48453785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
263, 37
               

               
Conread position:
               
134-438
               

               
Cow position:
               
chr18:8299836-8300154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
134-469
               

               
Cow position:
               
chr18:5766235-5766569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
204, 36
               

               
Conread position:
               
134-470
               

               
Cow position:
               
chr18:3166668-3166349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
81, 33
               

               
Conread position:
               
134-471
               

               
Cow position:
               
chr18:9066521-9066862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
110, 59
               

               
Conread position:
               
134-475
               

               
Cow position:
               
chr18:55747506-55747854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
134-487
               

               
Cow position:
               
chr18:51756915-51757272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
134-492
               

               
Cow position:
               
chr18:44262449-44262808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
48, 13
               

               
Conread position:
               
134-502
               

               
Cow position:
               
chr18:29958335-29957990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
134-504
               

               
Cow position:
               
chr18:7108949-7109323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
135-298
               

               
Cow position:
               
chr18:14085285-14085445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
135-456
               

               
Cow position:
               
chr18:39001979-39001667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
256, 109
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr18:6309907-6310242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
148, 32
               

               
Conread position:
               
135-474
               

               
Cow position:
               
chr18:42747417-42747764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 67
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr18:55505230-55505591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
202, 113
               

               
Conread position:
               
135-531
               

               
Cow position:
               
chr18:27109473-27109068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
35, 112
               

               
Conread position:
               
136-338
               

               
Cow position:
               
chr18:4330779-4330982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
136-471
               

               
Cow position:
               
chr18:5072588-5072255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr18:18919134-18918797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr18:31672689-31672352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
136-487
               

               
Cow position:
               
chr18:32873418-32873775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
151, 53
               

               
Conread position:
               
138-482
               

               
Cow position:
               
chr18:19193539-19193198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
175, 30
               

               
Conread position:
               
139-307
               

               
Cow position:
               
chr18:24022200-24022378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
139-491
               

               
Cow position:
               
chr18:20641663-20641319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
58, 36
               

               
Conread position:
               
139-579
               

               
Cow position:
               
chr18:51406083-51405640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
139-705
               

               
Cow position:
               
chr18:33896600-33896032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 31
               

               
Conread position:
               
140-471
               

               
Cow position:
               
chr18:11867169-11867500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 30
               

               
Conread position:
               
140-485
               

               
Cow position:
               
chr18:33299731-33300059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
140-490
               

               
Cow position:
               
chr18:9557811-9558148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
11, 34
               

               
Conread position:
               
141-297
               

               
Cow position:
               
chr18:35582271-35582117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
95, 29
               

               
Conread position:
               
141-471
               

               
Cow position:
               
chr18:8171255-8170929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
200, 15
               

               
Conread position:
               
141-490
               

               
Cow position:
               
chr18:20126135-20126474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
196, 29
               

               
Conread position:
               
141-517
               

               
Cow position:
               
chr18:30586390-30586027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
198, 29
               

               
Conread position:
               
144-493
               

               
Cow position:
               
chr18:43950656-43951011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
145-552
               

               
Cow position:
               
chr18:23616047-23615635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
151, 68
               

               
Conread position:
               
146-515
               

               
Cow position:
               
chr18:30225711-30225322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
148-394
               

               
Cow position:
               
chr18:51850723-51850482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 96
               

               
Conread position:
               
148-486
               

               
Cow position:
               
chr18:11779496-11779826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
193, 20
               

               
Conread position:
               
149-475
               

               
Cow position:
               
chr18:4556331-4555998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
17, 95
               

               
Conread position:
               
149-487
               

               
Cow position:
               
chr18:19640817-19641151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
192, 75
               

               
Conread position:
               
149-494
               

               
Cow position:
               
chr18:24266575-24266218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
154-472
               

               
Cow position:
               
chr18:51643527-51643206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
10, 58
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr18:52854893-52855132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 104
               

               
Conread position:
               
156-497
               

               
Cow position:
               
chr18:19687864-19688215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
185, 103
               

               
Conread position:
               
159-495
               

               
Cow position:
               
chr18:6005648-6005314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
130, 56
               

               
Conread position:
               
161-490
               

               
Cow position:
               
chr18:5632114-5632446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
180, 91
               

               
Conread position:
               
161-491
               

               
Cow position:
               
chr18:20174280-20173955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 86
               

               
Conread position:
               
162-437
               

               
Cow position:
               
chr18:858669-858953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
111, 106
               

               
Conread position:
               
162-465
               

               
Cow position:
               
chr18:42290473-42290178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
162-465
               

               
Cow position:
               
chr18:42293201-42292906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
151, 30
               

               
Conread position:
               
162-496
               

               
Cow position:
               
chr18:1571387-1571049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
163-437
               

               
Cow position:
               
chr18:2774282-2774008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
178, 27
               

               
Conread position:
               
163-481
               

               
Cow position:
               
chr18:29474591-29474911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
176, 95
               

               
Conread position:
               
164-463
               

               
Cow position:
               
chr18:26998733-26999043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 83
               

               
Conread position:
               
165-370
               

               
Cow position:
               
chr18:22274983-22274783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
170, 81
               

               
Conread position:
               
165-507
               

               
Cow position:
               
chr18:4264538-4264199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
174, 82
               

               
Conread position:
               
169-490
               

               
Cow position:
               
chr18:10214339-10214007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
71, 79
               

               
Conread position:
               
169-498
               

               
Cow position:
               
chr18:48242046-48242375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
67, 78
               

               
Conread position:
               
175-472
               

               
Cow position:
               
chr18:22056017-22055697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
175-491
               

               
Cow position:
               
chr18:54130471-54130157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
65, 70
               

               
Conread position:
               
175-496
               

               
Cow position:
               
chr18:23623770-23623443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
179-507
               

               
Cow position:
               
chr18:55549595-55549928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
143, 60
               

               
Conread position:
               
182-528
               

               
Cow position:
               
chr18:34813521-34813873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
155, 58
               

               
Conread position:
               
192-507
               

               
Cow position:
               
chr18:2146706-2146396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
192-514
               

               
Cow position:
               
chr18:727911-728220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
194-482
               

               
Cow position:
               
chr18:49268108-49267808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
66, 52
               

               
Conread position:
               
195-409
               

               
Cow position:
               
chr18:19883412-19883628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
134, 51
               

               
Conread position:
               
195-453
               

               
Cow position:
               
chr18:34834373-34834640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 50
               

               
Conread position:
               
195-470
               

               
Cow position:
               
chr18:15517294-15517013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
195-475
               

               
Cow position:
               
chr18:50959368-50959655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 55
               

               
Conread position:
               
195-495
               

               
Cow position:
               
chr18:12584961-12584656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
142, 220
               

               
Conread position:
               
196-468
               

               
Cow position:
               
chr18:29065500-29065233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 31
               

               
Conread position:
               
197-490
               

               
Cow position:
               
chr18:49038344-49038635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
200-491
               

               
Cow position:
               
chr18:43797066-43796777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
141, 47
               

               
Conread position:
               
201-438
               

               
Cow position:
               
chr18:4758151-4757901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
50, 123
               

               
Conread position:
               
201-459
               

               
Cow position:
               
chr18:24759767-24759509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
201-476
               

               
Cow position:
               
chr18:31711679-31711410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 57
               

               
Conread position:
               
203-475
               

               
Cow position:
               
chr18:53642862-53642583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
207-483
               

               
Cow position:
               
chr18:28930745-28930466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
134, 52
               

               
Conread position:
               
208-514
               

               
Cow position:
               
chr18:1931559-1931253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
209-496
               

               
Cow position:
               
chr18:22180888-22180594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
215-514
               

               
Cow position:
               
chr18:22569165-22568866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
217-492
               

               
Cow position:
               
chr18:47416898-47417184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
219-470
               

               
Cow position:
               
chr18:49015032-49015277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
95, 31
               

               
Conread position:
               
227-495
               

               
Cow position:
               
chr18:55692727-55693003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
227-504
               

               
Cow position:
               
chr18:19868349-19868061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
37, 75
               

               
Conread position:
               
237-490
               

               
Cow position:
               
chr18:52251939-52251672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
238-493
               

               
Cow position:
               
chr18:18843934-18844195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 161
               

               
Conread position:
               
248-486
               

               
Cow position:
               
chr18:50359260-50359502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
248-528
               

               
Cow position:
               
chr18:42438216-42437942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
102, 89
               

               
Conread position:
               
249-475
               

               
Cow position:
               
chr18:38937754-38937986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
251-486
               

               
Cow position:
               
chr18:27078802-27079043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
80, 230
               

               
Conread position:
               
252-493
               

               
Cow position:
               
chr18:31557226-31556974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
8, 233
               

               
Conread position:
               
253-475
               

               
Cow position:
               
chr18:21782627-21782851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
90, 65
               

               
Conread position:
               
254-514
               

               
Cow position:
               
chr18:23630667-23630413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
255-482
               

               
Cow position:
               
chr18:24719251-24719482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
86, 156
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr18:44908991-44909237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
255-497
               

               
Cow position:
               
chr18:45558085-45558329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 142
               

               
Conread position:
               
256-495
               

               
Cow position:
               
chr18:20462756-20462520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
227, 98
               

               
Conread position:
               
258-475
               

               
Cow position:
               
chr18:40047557-40047338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
258-496
               

               
Cow position:
               
chr18:39811641-39811397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 26
               

               
Conread position:
               
259-491
               

               
Cow position:
               
chr18:2773450-2773208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
82, 228
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr18:42427573-42427779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 162
               

               
Conread position:
               
270-490
               

               
Cow position:
               
chr18:6470048-6470272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
71, 127
               

               
Conread position:
               
270-502
               

               
Cow position:
               
chr18:25757358-25757122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
117, 209
               

               
Conread position:
               
271-492
               

               
Cow position:
               
chr18:15809846-15809629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
271-492
               

               
Cow position:
               
chr18:50632488-50632262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
70, 147
               

               
Conread position:
               
273-485
               

               
Cow position:
               
chr18:14172251-14172037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
285-489
               

               
Cow position:
               
chr18:47802122-47801916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
287-495
               

               
Cow position:
               
chr18:21751347-21751568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
292-475
               

               
Cow position:
               
chr18:8208450-8208257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 27
               

               
Conread position:
               
294-496
               

               
Cow position:
               
chr18:17195370-17195157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
315-496
               

               
Cow position:
               
chr18:22045415-22045224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
329-471
               

               
Cow position:
               
chr18:35236008-35235859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
337-464
               

               
Cow position:
               
chr18:45897702-45897577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
338-475
               

               
Cow position:
               
chr18:50004679-50004540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
338-490
               

               
Cow position:
               
chr18:4485625-4485779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
338-518
               

               
Cow position:
               
chr18:44514112-44514303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
467-813
               

               
Cow position:
               
chr18:22433358-22433703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
469-1041
               

               
Cow position:
               
chr18:29225108-29224535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
470-1042
               

               
Cow position:
               
chr18:28086003-28085421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
470-1047
               

               
Cow position:
               
chr18:22064936-22065507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
470-1047
               

               
Cow position:
               
chr18:32861075-32860494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
471-769
               

               
Cow position:
               
chr18:16259689-16259390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
478-722
               

               
Cow position:
               
chr18:50880901-50880660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 31
               

               
Conread position:
               
480-1066
               

               
Cow position:
               
chr18:25846615-25847180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 83
               

               
Conread position:
               
484-662
               

               
Cow position:
               
chr18:53047638-53047824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
515-822
               

               
Cow position:
               
chr18:1700965-1700669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 24
               

               
Conread position:
               
521-837
               

               
Cow position:
               
chr18:35471411-35471741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
18, 90
               

               
Conread position:
               
522-931
               

               
Cow position:
               
chr18:39474897-39475292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 59
               

               
Conread position:
               
530-874
               

               
Cow position:
               
chr18:27405274-27404922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
548-806
               

               
Cow position:
               
chr18:23504251-23504509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
109, 20
               

               
Conread position:
               
553-803
               

               
Cow position:
               
chr18:53029056-53028798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
111, 37
               

               
Conread position:
               
579-1055
               

               
Cow position:
               
chr18:8170503-8170024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
595-1047
               

               
Cow position:
               
chr18:48550287-48549846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 69
               

               
Conread position:
               
628-908
               

               
Cow position:
               
chr18:8204797-8204515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
79, 23
               

               
Conread position:
               
678-997
               

               
Cow position:
               
chr18:31393810-31393489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 44
               

               
Conread position:
               
699-866
               

               
Cow position:
               
chr18:2024690-2024858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
150, 118
               

               
Conread position:
               
702-1053
               

               
Cow position:
               
chr18:11367560-11367917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 23
               

               
Conread position:
               
710-1065
               

               
Cow position:
               
chr18:21290817-21291168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
47, 253
               

               
Conread position:
               
711-969
               

               
Cow position:
               
chr18:30438920-30438664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
719-933
               

               
Cow position:
               
chr18:1061838-1062046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
118, 26
               

               
Conread position:
               
720-990
               

               
Cow position:
               
chr18:31997635-31997352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
70, 237
               

               
Conread position:
               
720-1035
               

               
Cow position:
               
chr18:50790464-50790144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 203
               

               
Conread position:
               
720-1041
               

               
Cow position:
               
chr18:23669085-23669420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
38, 239
               

               
Conread position:
               
726-1035
               

               
Cow position:
               
chr18:54031874-54031560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
760-1035
               

               
Cow position:
               
chr18:16258996-16258713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
50, 65
               

               
Conread position:
               
787-1040
               

               
Cow position:
               
chr18:23316998-23317257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
56, 184
               

               
Conread position:
               
787-1041
               

               
Cow position:
               
chr18:22433821-22434082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 215
               

               
Conread position:
               
843-1005
               

               
Cow position:
               
chr18:35471878-35472045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 42
               
Show alignments to all cow chromosomes.