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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10225B12.5
        

               
Conread position:
               
29-124
               

               
Cow position:
               
chr19:13448658-13448563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
98-409
               

               
Cow position:
               
chr19:43203180-43202873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
243, 18
               

               
Conread position:
               
113-471
               

               
Cow position:
               
chr19:52185942-52185573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
114-437
               

               
Cow position:
               
chr19:23786018-23786326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
117-488
               

               
Cow position:
               
chr19:47453261-47453634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
5, 60
               

               
Conread position:
               
119-496
               

               
Cow position:
               
chr19:13267366-13266999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
9, 132
               

               
Conread position:
               
124-518
               

               
Cow position:
               
chr19:31127532-31127119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
25, 127
               

               
Conread position:
               
125-503
               

               
Cow position:
               
chr19:33903588-33903208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
127-485
               

               
Cow position:
               
chr19:8864583-8864941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
130-494
               

               
Cow position:
               
chr19:38500008-38500361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
204, 24
               

               
Conread position:
               
131-255
               

               
Cow position:
               
chr19:25851645-25851520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
131-255
               

               
Cow position:
               
chr19:25851989-25851864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
131-255
               

               
Cow position:
               
chr19:25865081-25864956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
131-264
               

               
Cow position:
               
chr19:25131453-25131588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
131-290
               

               
Cow position:
               
chr19:2138264-2138109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
131-294
               

               
Cow position:
               
chr19:1552072-1552233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
131-307
               

               
Cow position:
               
chr19:46918687-46918862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr19:10171842-10172021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 112
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr19:10173275-10173096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 111
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr19:32450923-32451101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
131-314
               

               
Cow position:
               
chr19:4329202-4329030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 53
               

               
Conread position:
               
131-317
               

               
Cow position:
               
chr19:47727731-47727551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr19:51185268-51185463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr19:47118654-47118456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-343
               

               
Cow position:
               
chr19:10232571-10232361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
131-371
               

               
Cow position:
               
chr19:14592895-14593137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
206, 38
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr19:16694203-16693941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr19:31595140-31595391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
131-382
               

               
Cow position:
               
chr19:36125429-36125679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
169, 42
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr19:7884424-7884677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr19:11424472-11424218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr19:11442822-11443090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr19:14347853-14348110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
110, 129
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr19:33468865-33469120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 96
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr19:35742003-35742279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
205, 30
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr19:10242427-10242697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
202, 39
               

               
Conread position:
               
131-413
               

               
Cow position:
               
chr19:22134304-22134031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
203, 115
               

               
Conread position:
               
131-429
               

               
Cow position:
               
chr19:31873953-31874247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 117
               

               
Conread position:
               
131-444
               

               
Cow position:
               
chr19:32457485-32457801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
169, 20
               

               
Conread position:
               
131-457
               

               
Cow position:
               
chr19:11171380-11171045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr19:21816803-21817142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 129
               

               
Conread position:
               
131-466
               

               
Cow position:
               
chr19:6688160-6687818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
131-467
               

               
Cow position:
               
chr19:25655393-25655064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 42
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr19:26976218-26975889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr19:44839071-44838758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr19:34287866-34288199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
229, 38
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr19:2589347-2589700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
39, 113
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr19:3246209-3245867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr19:6531732-6532062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
203, 37
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr19:48722870-48723221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
206, 113
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr19:14253479-14253833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr19:51285472-51285834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
33, 304
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr19:11376564-11376220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
131-490
               

               
Cow position:
               
chr19:38111313-38111671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
204, 82
               

               
Conread position:
               
131-490
               

               
Cow position:
               
chr19:55394747-55395111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
182, 93
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr19:30471501-30471153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
182, 38
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr19:39360984-39361357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
210, 23
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr19:53372055-53371691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 60
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr19:47859474-47859110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
210, 107
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr19:10080910-10081295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
111, 83
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr19:23304655-23304287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
37, 25
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr19:729894-729542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr19:1650344-1650713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 119
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr19:4445779-4445422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
238, 39
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr19:28014322-28014688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr19:56150228-56149858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
109, 189
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr19:25382860-25382474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr19:33290327-33290670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr19:24137103-24137474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr19:28554506-28554141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
210, 56
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr19:32754363-32754737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
34, 111
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr19:38842714-38842349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
40, 74
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr19:7668544-7668904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
243, 27
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr19:36845088-36845453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
29, 74
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr19:55590078-55590444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
66, 41
               

               
Conread position:
               
131-498
               

               
Cow position:
               
chr19:43690-44056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 24
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr19:12747935-12747559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 107
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr19:21335771-21335375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
40, 120
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr19:22450096-22449698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr19:46094798-46094412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-505
               

               
Cow position:
               
chr19:6417436-6417829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
168, 30
               

               
Conread position:
               
131-505
               

               
Cow position:
               
chr19:53791585-53791215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
208, 103
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr19:5433721-5433356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 129
               

               
Conread position:
               
132-311
               

               
Cow position:
               
chr19:34425425-34425598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
132-409
               

               
Cow position:
               
chr19:6079519-6079246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 116
               

               
Conread position:
               
132-469
               

               
Cow position:
               
chr19:3812169-3811840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
191, 38
               

               
Conread position:
               
132-471
               

               
Cow position:
               
chr19:34166206-34166552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 80
               

               
Conread position:
               
132-485
               

               
Cow position:
               
chr19:39622956-39622587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 19
               

               
Conread position:
               
132-494
               

               
Cow position:
               
chr19:11191776-11191414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
38, 115
               

               
Conread position:
               
132-494
               

               
Cow position:
               
chr19:53900305-53899932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
132-500
               

               
Cow position:
               
chr19:35108101-35107717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 70
               

               
Conread position:
               
133-249
               

               
Cow position:
               
chr19:48409354-48409469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr19:9408527-9408731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
133-385
               

               
Cow position:
               
chr19:25652911-25652665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
37, 95
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr19:22799236-22798978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 94
               

               
Conread position:
               
133-398
               

               
Cow position:
               
chr19:25807459-25807199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr19:34620187-34619915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-447
               

               
Cow position:
               
chr19:27612325-27612018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
201, 14
               

               
Conread position:
               
133-450
               

               
Cow position:
               
chr19:1664347-1664020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
180, 29
               

               
Conread position:
               
133-452
               

               
Cow position:
               
chr19:10545862-10545541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
154, 37
               

               
Conread position:
               
133-458
               

               
Cow position:
               
chr19:39057087-39057419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
133-463
               

               
Cow position:
               
chr19:21378626-21378290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
133-467
               

               
Cow position:
               
chr19:16096707-16096373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr19:13129716-13130047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
201, 37
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr19:46454697-46455024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr19:15887479-15887132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr19:39576727-39576390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
209, 37
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr19:48021790-48021453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr19:25727035-25726697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr19:36097066-36097412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
180, 78
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr19:47671593-47671922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
133-479
               

               
Cow position:
               
chr19:43431479-43431129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
183, 37
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr19:43035085-43035441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
71, 75
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr19:10186345-10186706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr19:21198978-21199349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
133-492
               

               
Cow position:
               
chr19:53418471-53418846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
133-495
               

               
Cow position:
               
chr19:24062135-24062481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr19:10755158-10755508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
251, 55
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr19:39751328-39751680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
201, 35
               

               
Conread position:
               
133-497
               

               
Cow position:
               
chr19:5185402-5185046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
204, 107
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr19:20661569-20661199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
75, 38
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr19:29368244-29368610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr19:29625749-29626115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
207, 37
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr19:7158881-7158498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
34, 119
               

               
Conread position:
               
133-501
               

               
Cow position:
               
chr19:18316831-18317204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
133-501
               

               
Cow position:
               
chr19:40051547-40051184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
134-296
               

               
Cow position:
               
chr19:44125485-44125648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chr19:31825169-31824994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
134-374
               

               
Cow position:
               
chr19:51401163-51400930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
203, 55
               

               
Conread position:
               
134-389
               

               
Cow position:
               
chr19:19919617-19919363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
207, 36
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr19:7404536-7404256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 113
               

               
Conread position:
               
134-415
               

               
Cow position:
               
chr19:52215007-52215289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
24, 5
               

               
Conread position:
               
134-423
               

               
Cow position:
               
chr19:23222480-23222763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
134-455
               

               
Cow position:
               
chr19:14472933-14472610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
174, 106
               

               
Conread position:
               
134-465
               

               
Cow position:
               
chr19:35762408-35762077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
177, 36
               

               
Conread position:
               
134-466
               

               
Cow position:
               
chr19:25526129-25526458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
203, 35
               

               
Conread position:
               
134-469
               

               
Cow position:
               
chr19:56063590-56063260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
134-472
               

               
Cow position:
               
chr19:12601651-12601987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
37, 118
               

               
Conread position:
               
134-484
               

               
Cow position:
               
chr19:42694836-42695186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
122, 36
               

               
Conread position:
               
134-489
               

               
Cow position:
               
chr19:20935598-20935951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
174, 36
               

               
Conread position:
               
134-490
               

               
Cow position:
               
chr19:3216862-3217206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
134-494
               

               
Cow position:
               
chr19:40449860-40450205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
134-495
               

               
Cow position:
               
chr19:20622497-20622865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
30, 75
               

               
Conread position:
               
134-791
               

               
Cow position:
               
chr19:2734295-2734951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr19:33237021-33237291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
206, 111
               

               
Conread position:
               
135-444
               

               
Cow position:
               
chr19:15719772-15719468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
206, 8
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr19:31535972-31536296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr19:9531078-9531447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr19:35846744-35847103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
189, 33
               

               
Conread position:
               
135-487
               

               
Cow position:
               
chr19:33033596-33033244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
126, 35
               

               
Conread position:
               
135-492
               

               
Cow position:
               
chr19:1968459-1968113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
234, 35
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr19:22039616-22039981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 61
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr19:23370991-23371364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
135-497
               

               
Cow position:
               
chr19:41498160-41497790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
32, 137
               

               
Conread position:
               
135-511
               

               
Cow position:
               
chr19:33912784-33912403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
27, 119
               

               
Conread position:
               
136-311
               

               
Cow position:
               
chr19:14928810-14928640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
136-311
               

               
Cow position:
               
chr19:15863195-15863031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
136-311
               

               
Cow position:
               
chr19:47187209-47187039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
136-412
               

               
Cow position:
               
chr19:6516106-6516390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
136-416
               

               
Cow position:
               
chr19:30886241-30886523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
205, 119
               

               
Conread position:
               
136-479
               

               
Cow position:
               
chr19:10213516-10213859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
196, 34
               

               
Conread position:
               
136-494
               

               
Cow position:
               
chr19:38340134-38339767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
198, 110
               

               
Conread position:
               
136-496
               

               
Cow position:
               
chr19:24760038-24759679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 37
               

               
Conread position:
               
137-297
               

               
Cow position:
               
chr19:38596466-38596620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
137-320
               

               
Cow position:
               
chr19:18500817-18500642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
137-406
               

               
Cow position:
               
chr19:43291895-43292170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
137-475
               

               
Cow position:
               
chr19:15852795-15853114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
197, 33
               

               
Conread position:
               
137-483
               

               
Cow position:
               
chr19:51621337-51620980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
158, 105
               

               
Conread position:
               
138-464
               

               
Cow position:
               
chr19:54942821-54943143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
138-511
               

               
Cow position:
               
chr19:48960243-48960618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
201, 102
               

               
Conread position:
               
139-400
               

               
Cow position:
               
chr19:31846695-31846439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 67
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr19:15437952-15438293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
139-491
               

               
Cow position:
               
chr19:26753883-26754245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
139-492
               

               
Cow position:
               
chr19:5913109-5912752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 108
               

               
Conread position:
               
139-499
               

               
Cow position:
               
chr19:41946035-41946391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
197, 34
               

               
Conread position:
               
140-382
               

               
Cow position:
               
chr19:47109889-47110133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
173, 30
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr19:4503067-4503329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
140-475
               

               
Cow position:
               
chr19:22043501-22043169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
140-488
               

               
Cow position:
               
chr19:24358379-24358060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
246, 30
               

               
Conread position:
               
141-471
               

               
Cow position:
               
chr19:52158386-52158726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
119, 32
               

               
Conread position:
               
141-487
               

               
Cow position:
               
chr19:52750909-52750559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
196, 115
               

               
Conread position:
               
141-514
               

               
Cow position:
               
chr19:2152728-2152354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
25, 107
               

               
Conread position:
               
142-304
               

               
Cow position:
               
chr19:50849674-50849830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
145-475
               

               
Cow position:
               
chr19:36221782-36222121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
155, 107
               

               
Conread position:
               
147-409
               

               
Cow position:
               
chr19:8033603-8033870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
190, 23
               

               
Conread position:
               
147-430
               

               
Cow position:
               
chr19:39254596-39254297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
147-463
               

               
Cow position:
               
chr19:29115601-29115905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
147-467
               

               
Cow position:
               
chr19:15092270-15091965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
193, 26
               

               
Conread position:
               
147-495
               

               
Cow position:
               
chr19:8869436-8869780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
16, 67
               

               
Conread position:
               
148-316
               

               
Cow position:
               
chr19:7492688-7492850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
148-498
               

               
Cow position:
               
chr19:33518958-33518599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
19, 5
               

               
Conread position:
               
150-497
               

               
Cow position:
               
chr19:13121414-13121075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
335, 73
               

               
Conread position:
               
151-493
               

               
Cow position:
               
chr19:16621491-16621155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
182, 19
               

               
Conread position:
               
154-502
               

               
Cow position:
               
chr19:25041374-25041032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
55, 105
               

               
Conread position:
               
156-498
               

               
Cow position:
               
chr19:28924624-28924969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
181, 90
               

               
Conread position:
               
159-463
               

               
Cow position:
               
chr19:42517388-42517078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
12, 18
               

               
Conread position:
               
160-437
               

               
Cow position:
               
chr19:47986725-47987007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
181, 98
               

               
Conread position:
               
161-331
               

               
Cow position:
               
chr19:12093873-12094047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
161-494
               

               
Cow position:
               
chr19:10971224-10970901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
171, 39
               

               
Conread position:
               
161-496
               

               
Cow position:
               
chr19:40323686-40324031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
50, 16
               

               
Conread position:
               
162-483
               

               
Cow position:
               
chr19:20666198-20665871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
194, 17
               

               
Conread position:
               
162-498
               

               
Cow position:
               
chr19:23378558-23378890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
179, 78
               

               
Conread position:
               
163-495
               

               
Cow position:
               
chr19:39664707-39664367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
165-454
               

               
Cow position:
               
chr19:51751295-51750999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 28
               

               
Conread position:
               
165-506
               

               
Cow position:
               
chr19:2221204-2220852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 86
               

               
Conread position:
               
166-479
               

               
Cow position:
               
chr19:24453635-24453316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
11, 73
               

               
Conread position:
               
169-483
               

               
Cow position:
               
chr19:11110854-11110533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
172, 77
               

               
Conread position:
               
173-475
               

               
Cow position:
               
chr19:51352095-51351802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 68
               

               
Conread position:
               
175-458
               

               
Cow position:
               
chr19:23394670-23394956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
121, 16
               

               
Conread position:
               
176-471
               

               
Cow position:
               
chr19:7637353-7637051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 72
               

               
Conread position:
               
177-495
               

               
Cow position:
               
chr19:2577454-2577769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
196, 36
               

               
Conread position:
               
180-470
               

               
Cow position:
               
chr19:4987879-4987583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 28
               

               
Conread position:
               
195-472
               

               
Cow position:
               
chr19:14632131-14631856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
146, 45
               

               
Conread position:
               
195-487
               

               
Cow position:
               
chr19:19549644-19549355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
195-519
               

               
Cow position:
               
chr19:41024128-41024454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
196-469
               

               
Cow position:
               
chr19:40127261-40126983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
145, 28
               

               
Conread position:
               
196-496
               

               
Cow position:
               
chr19:38410774-38411077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
140, 50
               

               
Conread position:
               
197-493
               

               
Cow position:
               
chr19:43413686-43413985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
200-471
               

               
Cow position:
               
chr19:34420321-34420593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
200-492
               

               
Cow position:
               
chr19:33575432-33575721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
107, 47
               

               
Conread position:
               
201-466
               

               
Cow position:
               
chr19:35870704-35870966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
54, 109
               

               
Conread position:
               
201-496
               

               
Cow position:
               
chr19:4297593-4297893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
140, 157
               

               
Conread position:
               
204-486
               

               
Cow position:
               
chr19:12052934-12052648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
204-486
               

               
Cow position:
               
chr19:12067657-12067943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 23
               

               
Conread position:
               
205-467
               

               
Cow position:
               
chr19:4459527-4459262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
136, 34
               

               
Conread position:
               
210-463
               

               
Cow position:
               
chr19:13488586-13488330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 30
               

               
Conread position:
               
211-471
               

               
Cow position:
               
chr19:23784496-23784240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
130, 36
               

               
Conread position:
               
212-513
               

               
Cow position:
               
chr19:30227442-30227752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 40
               

               
Conread position:
               
213-458
               

               
Cow position:
               
chr19:28447362-28447611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
128, 34
               

               
Conread position:
               
214-469
               

               
Cow position:
               
chr19:51970322-51970074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
122, 34
               

               
Conread position:
               
216-475
               

               
Cow position:
               
chr19:42768174-42767915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
88, 30
               

               
Conread position:
               
216-495
               

               
Cow position:
               
chr19:6309992-6309712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
97, 26
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chr19:11560118-11559825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 24
               

               
Conread position:
               
221-475
               

               
Cow position:
               
chr19:24692934-24693192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 225
               

               
Conread position:
               
221-507
               

               
Cow position:
               
chr19:21176812-21176527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 25
               

               
Conread position:
               
227-458
               

               
Cow position:
               
chr19:39613234-39613001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
228-494
               

               
Cow position:
               
chr19:17354794-17355064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
113, 21
               

               
Conread position:
               
229-462
               

               
Cow position:
               
chr19:33988002-33988244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
236-507
               

               
Cow position:
               
chr19:38021387-38021667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
154, 10
               

               
Conread position:
               
240-493
               

               
Cow position:
               
chr19:39795137-39795393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
249-471
               

               
Cow position:
               
chr19:49221667-49221438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr19:10597456-10597672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr19:11646521-11646752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
21, 179
               

               
Conread position:
               
251-492
               

               
Cow position:
               
chr19:20379077-20378830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
14, 213
               

               
Conread position:
               
251-507
               

               
Cow position:
               
chr19:16032675-16032939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
88, 8
               

               
Conread position:
               
252-475
               

               
Cow position:
               
chr19:23087941-23088169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
254-471
               

               
Cow position:
               
chr19:37467103-37466877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
254-486
               

               
Cow position:
               
chr19:23756783-23756552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
59, 67
               

               
Conread position:
               
254-492
               

               
Cow position:
               
chr19:13325527-13325293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
5, 143
               

               
Conread position:
               
254-493
               

               
Cow position:
               
chr19:23889528-23889283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
85, 221
               

               
Conread position:
               
254-502
               

               
Cow position:
               
chr19:23084814-23085074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
254-509
               

               
Cow position:
               
chr19:34758043-34757766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
255-471
               

               
Cow position:
               
chr19:10538591-10538374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 143
               

               
Conread position:
               
255-471
               

               
Cow position:
               
chr19:28810357-28810132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
255-489
               

               
Cow position:
               
chr19:56088476-56088247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
5, 82
               

               
Conread position:
               
255-494
               

               
Cow position:
               
chr19:10930456-10930219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
86, 46
               

               
Conread position:
               
255-495
               

               
Cow position:
               
chr19:38732099-38732347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
255-518
               

               
Cow position:
               
chr19:2068227-2068500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 64
               

               
Conread position:
               
256-486
               

               
Cow position:
               
chr19:52187448-52187683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 42
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr19:26167949-26167687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
258-514
               

               
Cow position:
               
chr19:30007155-30007408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
260-506
               

               
Cow position:
               
chr19:27966181-27965924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
81, 52
               

               
Conread position:
               
270-504
               

               
Cow position:
               
chr19:8185178-8185421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
71, 214
               

               
Conread position:
               
276-486
               

               
Cow position:
               
chr19:52728593-52728811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
287-496
               

               
Cow position:
               
chr19:7595153-7594945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
198, 25
               

               
Conread position:
               
325-498
               

               
Cow position:
               
chr19:24068254-24068071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
338-494
               

               
Cow position:
               
chr19:41388810-41388968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
338-495
               

               
Cow position:
               
chr19:19738048-19738211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
338-502
               

               
Cow position:
               
chr19:43499056-43498891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
338-518
               

               
Cow position:
               
chr19:22871207-22871022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
375-516
               

               
Cow position:
               
chr19:27968605-27968465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
450-667
               

               
Cow position:
               
chr19:4600976-4600760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 15
               

               
Conread position:
               
470-721
               

               
Cow position:
               
chr19:30188335-30188591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
470-805
               

               
Cow position:
               
chr19:25846760-25846443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 43
               

               
Conread position:
               
470-809
               

               
Cow position:
               
chr19:30349777-30350111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
67, 53
               

               
Conread position:
               
470-1041
               

               
Cow position:
               
chr19:3082526-3081966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
470-1056
               

               
Cow position:
               
chr19:19242526-19241960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
515-809
               

               
Cow position:
               
chr19:17439687-17439974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
515-1040
               

               
Cow position:
               
chr19:30746820-30746277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
515-1044
               

               
Cow position:
               
chr19:30051600-30052137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
187, 31
               

               
Conread position:
               
540-1035
               

               
Cow position:
               
chr19:425901-426390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
553-929
               

               
Cow position:
               
chr19:33284931-33285317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 120
               

               
Conread position:
               
566-721
               

               
Cow position:
               
chr19:51070526-51070683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
10, 85
               

               
Conread position:
               
594-1033
               

               
Cow position:
               
chr19:4610171-4609743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 63
               

               
Conread position:
               
604-1040
               

               
Cow position:
               
chr19:36479201-36478768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 28
               

               
Conread position:
               
608-1041
               

               
Cow position:
               
chr19:20700400-20699964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
675-997
               

               
Cow position:
               
chr19:14534402-14534730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 7
               

               
Conread position:
               
682-843
               

               
Cow position:
               
chr19:4600592-4600433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
691-904
               

               
Cow position:
               
chr19:29300293-29300077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
153, 10
               

               
Conread position:
               
697-942
               

               
Cow position:
               
chr19:38546201-38545951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
698-1032
               

               
Cow position:
               
chr19:28799918-28800253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
705-808
               

               
Cow position:
               
chr19:13633203-13633305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
719-1029
               

               
Cow position:
               
chr19:42706170-42706482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
118, 125
               

               
Conread position:
               
720-1035
               

               
Cow position:
               
chr19:3585029-3585347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
745-933
               

               
Cow position:
               
chr19:38395887-38396079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
756-1051
               

               
Cow position:
               
chr19:30452604-30452905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
91, 185
               

               
Conread position:
               
781-1029
               

               
Cow position:
               
chr19:19991632-19991379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 156
               
Show alignments to all cow chromosomes.