• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10225B12.5
        

               
Conread position:
               
86-475
               

               
Cow position:
               
chr2:46130341-46129966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
35, 29
               

               
Conread position:
               
97-287
               

               
Cow position:
               
chr2:45537615-45537432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 28
               

               
Conread position:
               
110-370
               

               
Cow position:
               
chr2:11412423-11412688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
34, 7
               

               
Conread position:
               
114-371
               

               
Cow position:
               
chr2:70945241-70945497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
117-492
               

               
Cow position:
               
chr2:32264553-32264176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
51, 7
               

               
Conread position:
               
117-492
               

               
Cow position:
               
chr2:84983078-84983460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
181, 8
               

               
Conread position:
               
118-409
               

               
Cow position:
               
chr2:43907343-43907058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
223, 15
               

               
Conread position:
               
118-493
               

               
Cow position:
               
chr2:33402644-33402269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 5
               

               
Conread position:
               
119-406
               

               
Cow position:
               
chr2:45439284-45439564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
253, 15
               

               
Conread position:
               
120-464
               

               
Cow position:
               
chr2:54967849-54968198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
96, 11
               

               
Conread position:
               
120-494
               

               
Cow position:
               
chr2:33554325-33553958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
221, 13
               

               
Conread position:
               
121-494
               

               
Cow position:
               
chr2:43130959-43131316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
122-410
               

               
Cow position:
               
chr2:54811011-54810724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 49
               

               
Conread position:
               
125-334
               

               
Cow position:
               
chr2:69238116-69238330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 134
               

               
Conread position:
               
125-338
               

               
Cow position:
               
chr2:45880931-45880721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
125-502
               

               
Cow position:
               
chr2:67596168-67595785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
139, 34
               

               
Conread position:
               
126-389
               

               
Cow position:
               
chr2:44025222-44025488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
44, 7
               

               
Conread position:
               
127-290
               

               
Cow position:
               
chr2:51824773-51824932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
127-471
               

               
Cow position:
               
chr2:15298385-15298730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
127-488
               

               
Cow position:
               
chr2:43624678-43624327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
214, 43
               

               
Conread position:
               
128-298
               

               
Cow position:
               
chr2:5998796-5998962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 19
               

               
Conread position:
               
128-490
               

               
Cow position:
               
chr2:18621261-18621628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
171, 42
               

               
Conread position:
               
128-495
               

               
Cow position:
               
chr2:41147713-41148095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
128-503
               

               
Cow position:
               
chr2:14826139-14826506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
128-513
               

               
Cow position:
               
chr2:29907347-29906962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
115, 42
               

               
Conread position:
               
130-471
               

               
Cow position:
               
chr2:42192286-42192620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
32, 101
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr2:16564539-16564686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
131-290
               

               
Cow position:
               
chr2:66615062-66614901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 144
               

               
Conread position:
               
131-294
               

               
Cow position:
               
chr2:45311270-45311106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 39
               

               
Conread position:
               
131-296
               

               
Cow position:
               
chr2:27600688-27600532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
131-296
               

               
Cow position:
               
chr2:39058706-39058877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
131-296
               

               
Cow position:
               
chr2:46353641-46353473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
117, 39
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr2:13543875-13544039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr2:21407773-21407938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 53
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr2:62685489-62685656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
118, 41
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr2:66563380-66563216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr2:68716816-68716653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
131-302
               

               
Cow position:
               
chr2:55480385-55480219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
131-310
               

               
Cow position:
               
chr2:988547-988720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr2:39662555-39662733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr2:62644441-62644615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
131-317
               

               
Cow position:
               
chr2:29268913-29269102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 8
               

               
Conread position:
               
131-335
               

               
Cow position:
               
chr2:1755888-1756093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
131-335
               

               
Cow position:
               
chr2:82019271-82019075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
131-338
               

               
Cow position:
               
chr2:69367278-69367072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 117
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr2:32417002-32416804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
181, 31
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr2:42936357-42936153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr2:70780949-70781146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr2:48361424-48361674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr2:32403120-32402858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr2:39263339-39263598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr2:69823439-69823701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
32, 111
               

               
Conread position:
               
131-397
               

               
Cow position:
               
chr2:46230910-46230642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
39, 117
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr2:30816812-30817092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr2:14854168-14854434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
199, 39
               

               
Conread position:
               
131-406
               

               
Cow position:
               
chr2:50277877-50278148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 62
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr2:44081289-44081569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr2:84970856-84970581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr2:41954736-41955016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
210, 117
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr2:45623869-45624143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
182, 113
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr2:69747766-69747485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
131-411
               

               
Cow position:
               
chr2:80963794-80963518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
203, 117
               

               
Conread position:
               
131-418
               

               
Cow position:
               
chr2:70704108-70704398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
210, 44
               

               
Conread position:
               
131-423
               

               
Cow position:
               
chr2:192606-192319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
211, 41
               

               
Conread position:
               
131-427
               

               
Cow position:
               
chr2:42255290-42255582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
182, 18
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr2:27173224-27173524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
210, 20
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr2:31460477-31460174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
210, 62
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr2:10320098-10319779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
169, 63
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr2:44232599-44232287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
131-461
               

               
Cow position:
               
chr2:16428544-16428216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
113, 39
               

               
Conread position:
               
131-462
               

               
Cow position:
               
chr2:2094453-2094802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 116
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr2:32351069-32350741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
210, 21
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr2:69676682-69676340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
131-464
               

               
Cow position:
               
chr2:1210915-1210583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
36, 122
               

               
Conread position:
               
131-464
               

               
Cow position:
               
chr2:25282964-25283302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 127
               

               
Conread position:
               
131-464
               

               
Cow position:
               
chr2:45542542-45542213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 39
               

               
Conread position:
               
131-466
               

               
Cow position:
               
chr2:39815430-39815105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
131-467
               

               
Cow position:
               
chr2:44170413-44170749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr2:54790135-54790476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
205, 111
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr2:83410363-83410693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
210, 70
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:21885-21559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
36, 128
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:777839-777488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
31, 137
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:15250034-15250363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:15597620-15597287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
199, 37
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:26501081-26500743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:41019361-41019021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
167, 29
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:46119908-46119572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
199, 113
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:46330913-46331262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:46344541-46344867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:55632632-55632967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
209, 25
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:73545041-73544709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:74249372-74249027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr2:81349028-81348700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
131-474
               

               
Cow position:
               
chr2:43835707-43835361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
187, 38
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr2:17940434-17940088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 119
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr2:31783790-31784128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr2:59397203-59396851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 94
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr2:69250824-69250467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
33, 176
               

               
Conread position:
               
131-476
               

               
Cow position:
               
chr2:46312307-46312636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
210, 15
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr2:31750116-31749760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
28, 117
               

               
Conread position:
               
131-484
               

               
Cow position:
               
chr2:16514637-16515001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
242, 96
               

               
Conread position:
               
131-484
               

               
Cow position:
               
chr2:37009269-37009613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-484
               

               
Cow position:
               
chr2:42607919-42608274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr2:16505622-16505261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
138, 39
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr2:28711137-28710798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
337, 19
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr2:38272314-38271941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
33, 16
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr2:78116494-78116150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 62
               

               
Conread position:
               
131-486
               

               
Cow position:
               
chr2:54700306-54700668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
206, 44
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr2:36963384-36963733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr2:69199462-69199109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
210, 61
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr2:7524284-7523915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr2:12686933-12686573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
35, 74
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr2:46033185-46033552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr2:13354528-13354898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
108, 116
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr2:39513876-39514254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
110, 312
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr2:80115954-80116316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 30
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr2:16839486-16839860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
210, 46
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr2:26170596-26170967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
33, 116
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr2:31355560-31355918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
35, 62
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr2:43994791-43995153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
200, 39
               

               
Conread position:
               
131-499
               

               
Cow position:
               
chr2:40484668-40484280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 37
               

               
Conread position:
               
131-499
               

               
Cow position:
               
chr2:46343285-46342925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
32, 62
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr2:36077199-36077584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr2:65269841-65269465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr2:69579830-69579451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr2:41622336-41622709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
131-503
               

               
Cow position:
               
chr2:42183221-42183594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
35, 67
               

               
Conread position:
               
131-503
               

               
Cow position:
               
chr2:68970590-68970971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 14
               

               
Conread position:
               
131-503
               

               
Cow position:
               
chr2:76122611-76122248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
38, 107
               

               
Conread position:
               
131-504
               

               
Cow position:
               
chr2:42969958-42970335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr2:18997578-18997948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 30
               

               
Conread position:
               
131-506
               

               
Cow position:
               
chr2:65587018-65587386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
210, 85
               

               
Conread position:
               
131-510
               

               
Cow position:
               
chr2:28820216-28820606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
131-515
               

               
Cow position:
               
chr2:24393832-24393459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 39
               

               
Conread position:
               
131-515
               

               
Cow position:
               
chr2:58074492-58074111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
131-518
               

               
Cow position:
               
chr2:5300444-5300839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
33, 63
               

               
Conread position:
               
131-523
               

               
Cow position:
               
chr2:27178509-27178895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
199, 110
               

               
Conread position:
               
131-528
               

               
Cow position:
               
chr2:13000771-13001165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
132-307
               

               
Cow position:
               
chr2:47808583-47808752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
132-339
               

               
Cow position:
               
chr2:61974653-61974853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
132-382
               

               
Cow position:
               
chr2:82262525-82262272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
132-389
               

               
Cow position:
               
chr2:26102634-26102878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
207, 50
               

               
Conread position:
               
132-453
               

               
Cow position:
               
chr2:13582436-13582762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
202, 39
               

               
Conread position:
               
132-463
               

               
Cow position:
               
chr2:61962599-61962276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
132-469
               

               
Cow position:
               
chr2:54654763-54654420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 27
               

               
Conread position:
               
132-475
               

               
Cow position:
               
chr2:26438871-26438529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
209, 50
               

               
Conread position:
               
132-475
               

               
Cow position:
               
chr2:74353749-74354107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 118
               

               
Conread position:
               
132-496
               

               
Cow position:
               
chr2:59179915-59180293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
132-531
               

               
Cow position:
               
chr2:44931412-44931005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
89, 107
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr2:60462966-60462553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
190, 43
               

               
Conread position:
               
132-555
               

               
Cow position:
               
chr2:60468345-60467932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
190, 39
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr2:36007730-36007572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-297
               

               
Cow position:
               
chr2:80797526-80797679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr2:56102611-56102439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-304
               

               
Cow position:
               
chr2:58248019-58247854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
133-311
               

               
Cow position:
               
chr2:45469862-45470035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
133-311
               

               
Cow position:
               
chr2:81894498-81894313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr2:42226412-42226228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
107, 12
               

               
Conread position:
               
133-338
               

               
Cow position:
               
chr2:24434421-24434225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-338
               

               
Cow position:
               
chr2:36105122-36105325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr2:25448185-25448384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr2:34535302-34535101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr2:47055763-47055963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 74
               

               
Conread position:
               
133-370
               

               
Cow position:
               
chr2:45665886-45666125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr2:549473-549219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
192, 29
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr2:46244167-46243913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 107
               

               
Conread position:
               
133-389
               

               
Cow position:
               
chr2:81388547-81388801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
133-401
               

               
Cow position:
               
chr2:46909579-46909313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
133-408
               

               
Cow position:
               
chr2:44191337-44191611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
133-412
               

               
Cow position:
               
chr2:28257316-28257598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 127
               

               
Conread position:
               
133-419
               

               
Cow position:
               
chr2:39584309-39584589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-437
               

               
Cow position:
               
chr2:20900609-20900298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
133-438
               

               
Cow position:
               
chr2:43789958-43790263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-439
               

               
Cow position:
               
chr2:39500884-39501200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
133-440
               

               
Cow position:
               
chr2:26806259-26805945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 35
               

               
Conread position:
               
133-446
               

               
Cow position:
               
chr2:53532953-53532660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
133-456
               

               
Cow position:
               
chr2:77157493-77157166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
201, 40
               

               
Conread position:
               
133-461
               

               
Cow position:
               
chr2:45367149-45367465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
115, 37
               

               
Conread position:
               
133-463
               

               
Cow position:
               
chr2:38795907-38795584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
35, 98
               

               
Conread position:
               
133-463
               

               
Cow position:
               
chr2:64212703-64212365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
133-469
               

               
Cow position:
               
chr2:46202126-46202461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:827753-827424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
207, 17
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:13001661-13001992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
201, 40
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:19494064-19494410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:21380545-21380208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:32114931-32115258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 29
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:42800900-42801231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:45478733-45478406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 84
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:45936102-45935772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
208, 26
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr2:77212322-77211990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
208, 38
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:17114877-17114542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
97, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:17967174-17966842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:20947227-20947568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
120, 21
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:24271084-24271414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
28, 118
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:34695096-34695416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:38785748-38785402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 14
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:41088259-41087906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
117, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:44065445-44065764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
207, 80
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:45619540-45619197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:46189243-46188897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:46351910-46351583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
208, 40
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:55526902-55526574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
248, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr2:56351062-56350712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
31, 60
               

               
Conread position:
               
133-484
               

               
Cow position:
               
chr2:71437525-71437168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr2:46227321-46227673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr2:53649883-53650226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
252, 37
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr2:44229833-44229496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 80
               

               
Conread position:
               
133-487
               

               
Cow position:
               
chr2:9063129-9063477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
180, 37
               

               
Conread position:
               
133-487
               

               
Cow position:
               
chr2:41248422-41248780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-490
               

               
Cow position:
               
chr2:19328400-19328747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
127, 38
               

               
Conread position:
               
133-492
               

               
Cow position:
               
chr2:7573645-7573302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr2:46745778-46746154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-495
               

               
Cow position:
               
chr2:62744152-62743789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
208, 42
               

               
Conread position:
               
133-497
               

               
Cow position:
               
chr2:25757773-25757411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
37, 111
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr2:34750125-34749772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr2:56828714-56828337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 41
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr2:7533912-7533555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
133-503
               

               
Cow position:
               
chr2:41145169-41145546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
141, 37
               

               
Conread position:
               
133-515
               

               
Cow position:
               
chr2:77467589-77467219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
133-517
               

               
Cow position:
               
chr2:21382998-21382613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-518
               

               
Cow position:
               
chr2:67301887-67302261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
29, 51
               

               
Conread position:
               
133-545
               

               
Cow position:
               
chr2:11656751-11657158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
199, 35
               

               
Conread position:
               
134-297
               

               
Cow position:
               
chr2:64473782-64473625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
132, 112
               

               
Conread position:
               
134-310
               

               
Cow position:
               
chr2:6697638-6697468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 26
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chr2:55960759-55960583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
29, 118
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chr2:58056922-58057092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
134-311
               

               
Cow position:
               
chr2:62978814-62978645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
134-318
               

               
Cow position:
               
chr2:21284790-21284968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
134-336
               

               
Cow position:
               
chr2:23493393-23493588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
134-339
               

               
Cow position:
               
chr2:51594620-51594821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
134-389
               

               
Cow position:
               
chr2:47073047-47073298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr2:70674583-70674856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
172, 5
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr2:81927710-81927978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
199, 36
               

               
Conread position:
               
134-423
               

               
Cow position:
               
chr2:19287221-19286937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
78, 39
               

               
Conread position:
               
134-437
               

               
Cow position:
               
chr2:10655996-10655703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
134-437
               

               
Cow position:
               
chr2:44482790-44482500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
225, 10
               

               
Conread position:
               
134-440
               

               
Cow position:
               
chr2:1762649-1762956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
134-456
               

               
Cow position:
               
chr2:36575596-36575916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
207, 102
               

               
Conread position:
               
134-466
               

               
Cow position:
               
chr2:47064971-47065303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
27, 50
               

               
Conread position:
               
134-469
               

               
Cow position:
               
chr2:46120776-46120451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
207, 33
               

               
Conread position:
               
134-471
               

               
Cow position:
               
chr2:992011-992348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
134-471
               

               
Cow position:
               
chr2:15674402-15674725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
134-471
               

               
Cow position:
               
chr2:76861604-76861255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
134-472
               

               
Cow position:
               
chr2:45575138-45574812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
207, 36
               

               
Conread position:
               
134-475
               

               
Cow position:
               
chr2:58153561-58153903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
107, 36
               

               
Conread position:
               
134-475
               

               
Cow position:
               
chr2:67745109-67745449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
165, 112
               

               
Conread position:
               
134-482
               

               
Cow position:
               
chr2:58135541-58135179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
134-485
               

               
Cow position:
               
chr2:32660030-32660394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
134-485
               

               
Cow position:
               
chr2:68190785-68190437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
152, 39
               

               
Conread position:
               
134-487
               

               
Cow position:
               
chr2:26851015-26851364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
30, 122
               

               
Conread position:
               
134-488
               

               
Cow position:
               
chr2:64323097-64323450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
38, 114
               

               
Conread position:
               
134-493
               

               
Cow position:
               
chr2:6038859-6039235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 192
               

               
Conread position:
               
134-493
               

               
Cow position:
               
chr2:51799466-51799120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
179, 36
               

               
Conread position:
               
134-494
               

               
Cow position:
               
chr2:38658923-38658577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 32
               

               
Conread position:
               
134-495
               

               
Cow position:
               
chr2:32048337-32048699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
202, 41
               

               
Conread position:
               
134-496
               

               
Cow position:
               
chr2:14710251-14709906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
134-496
               

               
Cow position:
               
chr2:41157827-41158177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
134-496
               

               
Cow position:
               
chr2:49467478-49467848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
16, 132
               

               
Conread position:
               
134-499
               

               
Cow position:
               
chr2:13035971-13036346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
134-499
               

               
Cow position:
               
chr2:84480660-84480277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
54, 36
               

               
Conread position:
               
134-508
               

               
Cow position:
               
chr2:1303805-1304184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
175, 48
               

               
Conread position:
               
134-518
               

               
Cow position:
               
chr2:17328604-17328986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 99
               

               
Conread position:
               
134-521
               

               
Cow position:
               
chr2:75227057-75227447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr2:46184413-46184251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
32, 128
               

               
Conread position:
               
135-307
               

               
Cow position:
               
chr2:80839274-80839104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 34
               

               
Conread position:
               
135-374
               

               
Cow position:
               
chr2:9324853-9325095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 35
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr2:46194652-46194883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
238, 106
               

               
Conread position:
               
135-379
               

               
Cow position:
               
chr2:50580229-50580464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr2:1638459-1638737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
202, 35
               

               
Conread position:
               
135-453
               

               
Cow position:
               
chr2:50565783-50566115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
135-466
               

               
Cow position:
               
chr2:72527813-72528153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr2:82581074-82580740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr2:33251218-33250888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
205, 17
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr2:38965480-38965809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
200, 35
               

               
Conread position:
               
135-483
               

               
Cow position:
               
chr2:76340802-76340440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr2:47090619-47090977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
15, 57
               

               
Conread position:
               
135-487
               

               
Cow position:
               
chr2:45499345-45498993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
135-493
               

               
Cow position:
               
chr2:7194059-7194425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
33, 81
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr2:27358898-27359257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
157, 105
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr2:33497343-33496982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr2:41452089-41452454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
12, 40
               

               
Conread position:
               
135-497
               

               
Cow position:
               
chr2:36136868-36137233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
11, 127
               

               
Conread position:
               
135-499
               

               
Cow position:
               
chr2:59992388-59992028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
202, 78
               

               
Conread position:
               
135-500
               

               
Cow position:
               
chr2:38362511-38362155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
135-507
               

               
Cow position:
               
chr2:80275435-80275059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
185, 39
               

               
Conread position:
               
135-531
               

               
Cow position:
               
chr2:76110251-76110650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
136-316
               

               
Cow position:
               
chr2:40691347-40691519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
136-339
               

               
Cow position:
               
chr2:11616954-11617151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
136-339
               

               
Cow position:
               
chr2:38273399-38273606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
136-380
               

               
Cow position:
               
chr2:45912776-45912529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
136-389
               

               
Cow position:
               
chr2:70495131-70495379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
205, 34
               

               
Conread position:
               
136-468
               

               
Cow position:
               
chr2:69419728-69419397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 34
               

               
Conread position:
               
136-471
               

               
Cow position:
               
chr2:73353649-73354002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 111
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr2:78249595-78249939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
198, 34
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr2:33472127-33471790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
136-482
               

               
Cow position:
               
chr2:73637318-73636963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 92
               

               
Conread position:
               
136-483
               

               
Cow position:
               
chr2:51098232-51097876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
136-486
               

               
Cow position:
               
chr2:6160470-6160139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
205, 18
               

               
Conread position:
               
136-496
               

               
Cow position:
               
chr2:24218357-24217996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
58, 108
               

               
Conread position:
               
136-514
               

               
Cow position:
               
chr2:56937540-56937911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 11
               

               
Conread position:
               
137-339
               

               
Cow position:
               
chr2:50445757-50445958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
176, 109
               

               
Conread position:
               
137-450
               

               
Cow position:
               
chr2:45535324-45535640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
204, 33
               

               
Conread position:
               
137-475
               

               
Cow position:
               
chr2:54883325-54883667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
137-487
               

               
Cow position:
               
chr2:76314005-76313656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
102, 50
               

               
Conread position:
               
137-492
               

               
Cow position:
               
chr2:22372088-22371738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
204, 84
               

               
Conread position:
               
137-494
               

               
Cow position:
               
chr2:58869302-58868945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 107
               

               
Conread position:
               
137-495
               

               
Cow position:
               
chr2:85795095-85794749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
215, 31
               

               
Conread position:
               
137-496
               

               
Cow position:
               
chr2:29290451-29290097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
53, 110
               

               
Conread position:
               
138-497
               

               
Cow position:
               
chr2:6267921-6267545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
139-455
               

               
Cow position:
               
chr2:12802811-12802492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 8
               

               
Conread position:
               
139-467
               

               
Cow position:
               
chr2:39335004-39334682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
29, 36
               

               
Conread position:
               
139-470
               

               
Cow position:
               
chr2:24858863-24859199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
28, 104
               

               
Conread position:
               
139-471
               

               
Cow position:
               
chr2:18858283-18857961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
139-471
               

               
Cow position:
               
chr2:66480327-66480004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr2:19156324-19155986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
24, 110
               

               
Conread position:
               
139-482
               

               
Cow position:
               
chr2:19212191-19211854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 22
               

               
Conread position:
               
139-483
               

               
Cow position:
               
chr2:24593732-24594070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
333, 31
               

               
Conread position:
               
139-485
               

               
Cow position:
               
chr2:13369517-13369867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
202, 36
               

               
Conread position:
               
139-490
               

               
Cow position:
               
chr2:40728213-40728576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
90, 107
               

               
Conread position:
               
139-496
               

               
Cow position:
               
chr2:72004085-72003726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
139-518
               

               
Cow position:
               
chr2:80099-79720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
139-518
               

               
Cow position:
               
chr2:19294455-19294830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 28
               

               
Conread position:
               
140-475
               

               
Cow position:
               
chr2:13684569-13684890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
194, 28
               

               
Conread position:
               
140-476
               

               
Cow position:
               
chr2:14218510-14218855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
100, 31
               

               
Conread position:
               
140-487
               

               
Cow position:
               
chr2:12682799-12682445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
140-514
               

               
Cow position:
               
chr2:25597633-25597264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
167, 30
               

               
Conread position:
               
140-517
               

               
Cow position:
               
chr2:46379231-46378868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 62
               

               
Conread position:
               
141-473
               

               
Cow position:
               
chr2:65901890-65902223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 32
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr2:47147772-47148116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
172, 29
               

               
Conread position:
               
141-496
               

               
Cow position:
               
chr2:80769981-80770322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
189, 29
               

               
Conread position:
               
141-497
               

               
Cow position:
               
chr2:44051173-44051533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
185, 29
               

               
Conread position:
               
142-389
               

               
Cow position:
               
chr2:39597827-39598073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
145-481
               

               
Cow position:
               
chr2:47047886-47047548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 102
               

               
Conread position:
               
145-494
               

               
Cow position:
               
chr2:38259591-38259236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 28
               

               
Conread position:
               
145-517
               

               
Cow position:
               
chr2:56821533-56821147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 259
               

               
Conread position:
               
146-472
               

               
Cow position:
               
chr2:15059192-15058865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
195, 25
               

               
Conread position:
               
146-498
               

               
Cow position:
               
chr2:13877322-13877655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
147-416
               

               
Cow position:
               
chr2:39237287-39237547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
188, 26
               

               
Conread position:
               
147-471
               

               
Cow position:
               
chr2:71622180-71621853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
194, 23
               

               
Conread position:
               
147-496
               

               
Cow position:
               
chr2:48525677-48525313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
148-469
               

               
Cow position:
               
chr2:60690755-60691074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
189, 20
               

               
Conread position:
               
149-475
               

               
Cow position:
               
chr2:46137284-46136972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 21
               

               
Conread position:
               
149-490
               

               
Cow position:
               
chr2:82957548-82957898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 101
               

               
Conread position:
               
149-523
               

               
Cow position:
               
chr2:28726345-28726708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
23, 60
               

               
Conread position:
               
150-394
               

               
Cow position:
               
chr2:17410133-17409889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
187, 96
               

               
Conread position:
               
150-463
               

               
Cow position:
               
chr2:65931836-65932156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
153-476
               

               
Cow position:
               
chr2:39228682-39229009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 6
               

               
Conread position:
               
154-471
               

               
Cow position:
               
chr2:30351827-30351508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
154-483
               

               
Cow position:
               
chr2:33532078-33531737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
156-458
               

               
Cow position:
               
chr2:12051027-12051317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 94
               

               
Conread position:
               
159-520
               

               
Cow position:
               
chr2:24602280-24602647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
160-408
               

               
Cow position:
               
chr2:44222702-44222956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 103
               

               
Conread position:
               
160-497
               

               
Cow position:
               
chr2:44022925-44022583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
181, 32
               

               
Conread position:
               
161-475
               

               
Cow position:
               
chr2:16513742-16514055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
180, 79
               

               
Conread position:
               
162-462
               

               
Cow position:
               
chr2:67386595-67386284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
162-494
               

               
Cow position:
               
chr2:41040825-41040490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
162-518
               

               
Cow position:
               
chr2:44007302-44007673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
179, 38
               

               
Conread position:
               
162-536
               

               
Cow position:
               
chr2:48635161-48634796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
163-497
               

               
Cow position:
               
chr2:40411285-40410951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
173, 77
               

               
Conread position:
               
164-491
               

               
Cow position:
               
chr2:4016954-4016644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 86
               

               
Conread position:
               
164-500
               

               
Cow position:
               
chr2:55496401-55496070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
177, 58
               

               
Conread position:
               
165-419
               

               
Cow position:
               
chr2:3981781-3982034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
176, 59
               

               
Conread position:
               
165-475
               

               
Cow position:
               
chr2:387888-387576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
147, 83
               

               
Conread position:
               
169-471
               

               
Cow position:
               
chr2:29734713-29735022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
128, 83
               

               
Conread position:
               
169-475
               

               
Cow position:
               
chr2:10505735-10505412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 279
               

               
Conread position:
               
169-508
               

               
Cow position:
               
chr2:67927905-67927562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
168, 69
               

               
Conread position:
               
170-409
               

               
Cow position:
               
chr2:77281911-77282151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
171, 78
               

               
Conread position:
               
175-471
               

               
Cow position:
               
chr2:45642594-45642297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
85, 65
               

               
Conread position:
               
175-478
               

               
Cow position:
               
chr2:46204415-46204724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
166, 17
               

               
Conread position:
               
175-489
               

               
Cow position:
               
chr2:19137997-19137677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
175-496
               

               
Cow position:
               
chr2:46971015-46971328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
137, 83
               

               
Conread position:
               
175-508
               

               
Cow position:
               
chr2:76762112-76762450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
138, 63
               

               
Conread position:
               
176-482
               

               
Cow position:
               
chr2:32431839-32431531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 46
               

               
Conread position:
               
177-500
               

               
Cow position:
               
chr2:50450009-50449683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
20, 56
               

               
Conread position:
               
181-518
               

               
Cow position:
               
chr2:29343509-29343165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
110, 65
               

               
Conread position:
               
182-485
               

               
Cow position:
               
chr2:29927955-29928272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 66
               

               
Conread position:
               
183-439
               

               
Cow position:
               
chr2:46968285-46968029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 16
               

               
Conread position:
               
185-488
               

               
Cow position:
               
chr2:72654098-72654416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 61
               

               
Conread position:
               
185-582
               

               
Cow position:
               
chr2:37791590-37791189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
188-475
               

               
Cow position:
               
chr2:1708881-1709167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
143, 57
               

               
Conread position:
               
193-502
               

               
Cow position:
               
chr2:40257501-40257188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
148, 57
               

               
Conread position:
               
194-500
               

               
Cow position:
               
chr2:40597488-40597799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
8, 54
               

               
Conread position:
               
195-428
               

               
Cow position:
               
chr2:68870610-68870845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 20
               

               
Conread position:
               
195-464
               

               
Cow position:
               
chr2:69350652-69350379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
146, 57
               

               
Conread position:
               
195-475
               

               
Cow position:
               
chr2:24530289-24530563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 29
               

               
Conread position:
               
195-475
               

               
Cow position:
               
chr2:46058094-46057812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 51
               

               
Conread position:
               
195-486
               

               
Cow position:
               
chr2:8843911-8843614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
146, 49
               

               
Conread position:
               
196-496
               

               
Cow position:
               
chr2:39371337-39371630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
138, 24
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr2:35948762-35948501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
197-468
               

               
Cow position:
               
chr2:70847344-70847070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
144, 28
               

               
Conread position:
               
198-475
               

               
Cow position:
               
chr2:57733348-57733627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
201-461
               

               
Cow position:
               
chr2:63074938-63074678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
201-496
               

               
Cow position:
               
chr2:15348313-15348616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
140, 52
               

               
Conread position:
               
201-496
               

               
Cow position:
               
chr2:43136529-43136222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 289
               

               
Conread position:
               
201-497
               

               
Cow position:
               
chr2:22677114-22677415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
205-494
               

               
Cow position:
               
chr2:41381928-41382205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
207-481
               

               
Cow position:
               
chr2:45596908-45597184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 45
               

               
Conread position:
               
211-496
               

               
Cow position:
               
chr2:13672456-13672738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
216-472
               

               
Cow position:
               
chr2:41462490-41462228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
216-479
               

               
Cow position:
               
chr2:80177652-80177394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr2:10628599-10628316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
120, 26
               

               
Conread position:
               
216-508
               

               
Cow position:
               
chr2:28301141-28301433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
125, 46
               

               
Conread position:
               
218-475
               

               
Cow position:
               
chr2:46161893-46162152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 40
               

               
Conread position:
               
227-496
               

               
Cow position:
               
chr2:13013037-13013302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
227-497
               

               
Cow position:
               
chr2:2485791-2486066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
114, 21
               

               
Conread position:
               
228-497
               

               
Cow position:
               
chr2:43990717-43990992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
237-492
               

               
Cow position:
               
chr2:50914057-50913799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr2:39750071-39750304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
102, 19
               

               
Conread position:
               
239-494
               

               
Cow position:
               
chr2:60091478-60091214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 179
               

               
Conread position:
               
239-496
               

               
Cow position:
               
chr2:39566738-39566475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 22
               

               
Conread position:
               
244-463
               

               
Cow position:
               
chr2:38651476-38651694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
250-470
               

               
Cow position:
               
chr2:1422316-1422547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
250-471
               

               
Cow position:
               
chr2:994399-994176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
10, 70
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr2:82116057-82116286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 71
               

               
Conread position:
               
251-485
               

               
Cow position:
               
chr2:9726130-9725889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
251-498
               

               
Cow position:
               
chr2:43474143-43474402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 184
               

               
Conread position:
               
253-475
               

               
Cow position:
               
chr2:19058123-19058352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 128
               

               
Conread position:
               
253-476
               

               
Cow position:
               
chr2:46164529-46164301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 6
               

               
Conread position:
               
254-471
               

               
Cow position:
               
chr2:28330776-28330555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
84, 112
               

               
Conread position:
               
254-480
               

               
Cow position:
               
chr2:15871909-15872134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 139
               

               
Conread position:
               
254-484
               

               
Cow position:
               
chr2:38640295-38640527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 5
               

               
Conread position:
               
254-500
               

               
Cow position:
               
chr2:46223016-46222788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
254-516
               

               
Cow position:
               
chr2:39271460-39271210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
54, 95
               

               
Conread position:
               
255-485
               

               
Cow position:
               
chr2:44168040-44168271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
257-493
               

               
Cow position:
               
chr2:81480824-81481061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 223
               

               
Conread position:
               
258-474
               

               
Cow position:
               
chr2:49717113-49716887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
258-475
               

               
Cow position:
               
chr2:12950190-12949964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
258-485
               

               
Cow position:
               
chr2:40373423-40373199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
67, 130
               

               
Conread position:
               
258-492
               

               
Cow position:
               
chr2:32988540-32988786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 232
               

               
Conread position:
               
258-494
               

               
Cow position:
               
chr2:61562052-61561813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
258-504
               

               
Cow position:
               
chr2:38837542-38837279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
259-475
               

               
Cow position:
               
chr2:40703690-40703471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
82, 178
               

               
Conread position:
               
259-487
               

               
Cow position:
               
chr2:53491475-53491249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 134
               

               
Conread position:
               
260-502
               

               
Cow position:
               
chr2:43591396-43591148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
53, 237
               

               
Conread position:
               
261-495
               

               
Cow position:
               
chr2:47879219-47879455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 125
               

               
Conread position:
               
261-502
               

               
Cow position:
               
chr2:44197852-44198107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
270-472
               

               
Cow position:
               
chr2:21049340-21049138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 123
               

               
Conread position:
               
271-469
               

               
Cow position:
               
chr2:51099987-51099780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
271-475
               

               
Cow position:
               
chr2:3739857-3739642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
276-511
               

               
Cow position:
               
chr2:72315819-72315575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
65, 97
               

               
Conread position:
               
277-496
               

               
Cow position:
               
chr2:29395015-29394786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 208
               

               
Conread position:
               
285-493
               

               
Cow position:
               
chr2:13468217-13468434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
292-498
               

               
Cow position:
               
chr2:78379410-78379198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
302-475
               

               
Cow position:
               
chr2:12873430-12873607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
39, 94
               

               
Conread position:
               
302-504
               

               
Cow position:
               
chr2:11435305-11435516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr2:44215522-44215733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
305-494
               

               
Cow position:
               
chr2:2031990-2031791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
11, 180
               

               
Conread position:
               
337-490
               

               
Cow position:
               
chr2:63568769-63568924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
337-500
               

               
Cow position:
               
chr2:28872951-28873119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 67
               

               
Conread position:
               
337-506
               

               
Cow position:
               
chr2:51417240-51417076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 49
               

               
Conread position:
               
338-486
               

               
Cow position:
               
chr2:73981692-73981840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
338-497
               

               
Cow position:
               
chr2:39187431-39187591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
341-497
               

               
Cow position:
               
chr2:3773264-3773104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
341-498
               

               
Cow position:
               
chr2:19842851-19843008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
341-508
               

               
Cow position:
               
chr2:42897728-42897901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
363-506
               

               
Cow position:
               
chr2:28452861-28452717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
470-948
               

               
Cow position:
               
chr2:41491102-41490623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 38
               

               
Conread position:
               
470-1040
               

               
Cow position:
               
chr2:74387666-74388239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
470-1045
               

               
Cow position:
               
chr2:32393856-32393295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 63
               

               
Conread position:
               
472-1035
               

               
Cow position:
               
chr2:53716526-53717099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
479-1030
               

               
Cow position:
               
chr2:77968058-77968602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
391
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 39
               

               
Conread position:
               
483-1005
               

               
Cow position:
               
chr2:21697266-21697814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 198
               

               
Conread position:
               
512-1043
               

               
Cow position:
               
chr2:33791057-33791598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 97
               

               
Conread position:
               
514-705
               

               
Cow position:
               
chr2:9043618-9043426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 9
               

               
Conread position:
               
514-822
               

               
Cow position:
               
chr2:7779054-7779386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 110
               

               
Conread position:
               
514-900
               

               
Cow position:
               
chr2:39196351-39196731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
15, 90
               

               
Conread position:
               
515-721
               

               
Cow position:
               
chr2:3544180-3544384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
515-806
               

               
Cow position:
               
chr2:42286077-42286391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
515-1047
               

               
Cow position:
               
chr2:63287726-63288277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 106
               

               
Conread position:
               
517-1028
               

               
Cow position:
               
chr2:71121442-71120917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 35
               

               
Conread position:
               
517-1042
               

               
Cow position:
               
chr2:62673837-62674350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
521-1042
               

               
Cow position:
               
chr2:72599223-72598681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
527-818
               

               
Cow position:
               
chr2:47746633-47746338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
540-772
               

               
Cow position:
               
chr2:37003685-37003456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
166, 14
               

               
Conread position:
               
540-908
               

               
Cow position:
               
chr2:7212184-7211811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
544-1035
               

               
Cow position:
               
chr2:43344905-43345398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
555-734
               

               
Cow position:
               
chr2:13048595-13048411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
44, 97
               

               
Conread position:
               
556-1034
               

               
Cow position:
               
chr2:18249508-18250007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 80
               

               
Conread position:
               
557-953
               

               
Cow position:
               
chr2:64073930-64073519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
567-847
               

               
Cow position:
               
chr2:3296553-3296269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
205, 88
               

               
Conread position:
               
586-1014
               

               
Cow position:
               
chr2:33825598-33826028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 51
               

               
Conread position:
               
587-846
               

               
Cow position:
               
chr2:31490575-31490324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
614-922
               

               
Cow position:
               
chr2:76055238-76055552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 41
               

               
Conread position:
               
631-1035
               

               
Cow position:
               
chr2:27145055-27145479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
700-929
               

               
Cow position:
               
chr2:11467417-11467646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
704-1022
               

               
Cow position:
               
chr2:21703699-21704024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
711-864
               

               
Cow position:
               
chr2:58771613-58771456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 11
               

               
Conread position:
               
711-924
               

               
Cow position:
               
chr2:55469973-55470186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 97
               

               
Conread position:
               
711-1023
               

               
Cow position:
               
chr2:27319075-27318757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
712-941
               

               
Cow position:
               
chr2:35447648-35447883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
713-965
               

               
Cow position:
               
chr2:69982630-69982377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 12
               

               
Conread position:
               
718-928
               

               
Cow position:
               
chr2:66435493-66435283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
130, 59
               

               
Conread position:
               
719-942
               

               
Cow position:
               
chr2:68360368-68360136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
109, 224
               

               
Conread position:
               
719-969
               

               
Cow position:
               
chr2:6292843-6292585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
719-1035
               

               
Cow position:
               
chr2:35304971-35304653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
720-854
               

               
Cow position:
               
chr2:9130534-9130667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
720-929
               

               
Cow position:
               
chr2:46207154-46207366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
129, 91
               

               
Conread position:
               
720-996
               

               
Cow position:
               
chr2:20302154-20301884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
125, 19
               

               
Conread position:
               
720-1020
               

               
Cow position:
               
chr2:46140961-46141262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
720-1041
               

               
Cow position:
               
chr2:50379818-50379490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
108, 245
               

               
Conread position:
               
720-1043
               

               
Cow position:
               
chr2:10296309-10295983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 112
               

               
Conread position:
               
721-952
               

               
Cow position:
               
chr2:6333925-6334163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 49
               

               
Conread position:
               
723-1035
               

               
Cow position:
               
chr2:908627-908318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 173
               

               
Conread position:
               
726-1005
               

               
Cow position:
               
chr2:39508675-39508385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
732-1035
               

               
Cow position:
               
chr2:42896935-42897241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
107, 16
               

               
Conread position:
               
745-1040
               

               
Cow position:
               
chr2:85056183-85055893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
761-1042
               

               
Cow position:
               
chr2:24884126-24883840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 69
               

               
Conread position:
               
766-986
               

               
Cow position:
               
chr2:51827494-51827720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
768-1021
               

               
Cow position:
               
chr2:19749769-19749509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 161
               

               
Conread position:
               
770-1035
               

               
Cow position:
               
chr2:54890473-54890205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
846-1042
               

               
Cow position:
               
chr2:14465477-14465679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 88
               
Show alignments to all cow chromosomes.