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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10225B12.5
        

               
Conread position:
               
104-475
               

               
Cow position:
               
chr23:9805924-9805561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
209, 151
               

               
Conread position:
               
104-500
               

               
Cow position:
               
chr23:12363790-12363392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 19
               

               
Conread position:
               
118-472
               

               
Cow position:
               
chr23:39049582-39049241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
142, 52
               

               
Conread position:
               
120-494
               

               
Cow position:
               
chr23:16246577-16246960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
183, 107
               

               
Conread position:
               
125-494
               

               
Cow position:
               
chr23:26849053-26848674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
127-475
               

               
Cow position:
               
chr23:2282323-2281986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
206, 5
               

               
Conread position:
               
127-475
               

               
Cow position:
               
chr23:4726637-4726994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
114, 175
               

               
Conread position:
               
127-481
               

               
Cow position:
               
chr23:33711613-33711969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
210, 5
               

               
Conread position:
               
127-494
               

               
Cow position:
               
chr23:34416410-34416788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
5, 119
               

               
Conread position:
               
127-495
               

               
Cow position:
               
chr23:13520300-13520666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
173, 119
               

               
Conread position:
               
128-471
               

               
Cow position:
               
chr23:4968672-4968333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
34, 120
               

               
Conread position:
               
128-506
               

               
Cow position:
               
chr23:3245070-3244682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
128-512
               

               
Cow position:
               
chr23:18286050-18286425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
209, 19
               

               
Conread position:
               
130-371
               

               
Cow position:
               
chr23:3262643-3262403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
200, 118
               

               
Conread position:
               
131-283
               

               
Cow position:
               
chr23:10014393-10014542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-298
               

               
Cow position:
               
chr23:4966674-4966838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 52
               

               
Conread position:
               
131-310
               

               
Cow position:
               
chr23:23113883-23114061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr23:1803647-1803816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
131-311
               

               
Cow position:
               
chr23:26942294-26942472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
131-381
               

               
Cow position:
               
chr23:36309275-36309525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
206, 39
               

               
Conread position:
               
131-383
               

               
Cow position:
               
chr23:24984316-24984063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 65
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr23:1767684-1767943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr23:4104259-4104508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
202, 14
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr23:6592849-6592595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 120
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr23:10554154-10553896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
206, 39
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr23:16700188-16699929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
131-403
               

               
Cow position:
               
chr23:13599199-13599467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr23:13945883-13946169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
42, 119
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr23:1398184-1397904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr23:21336638-21336351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr23:1923982-1923694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
131-424
               

               
Cow position:
               
chr23:33622298-33621996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
39, 73
               

               
Conread position:
               
131-433
               

               
Cow position:
               
chr23:40844507-40844802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
208, 57
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr23:5723397-5723701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
22, 116
               

               
Conread position:
               
131-437
               

               
Cow position:
               
chr23:23409590-23409886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 118
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr23:21445970-21446286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr23:16631122-16631451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr23:26632657-26632983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 39
               

               
Conread position:
               
131-466
               

               
Cow position:
               
chr23:11129088-11129429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 15
               

               
Conread position:
               
131-466
               

               
Cow position:
               
chr23:18416194-18415864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr23:41472468-41472821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
131-470
               

               
Cow position:
               
chr23:10416573-10416231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
68, 104
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr23:9734268-9734618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
182, 117
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr23:20248842-20248496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
208, 113
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr23:22804578-22804920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
48, 116
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr23:26949053-26949389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
210, 115
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr23:37065695-37066054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr23:5451179-5451524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr23:15742946-15743293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
210, 40
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr23:16847820-16848186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr23:33569993-33570345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
92, 23
               

               
Conread position:
               
131-490
               

               
Cow position:
               
chr23:1885318-1884958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 117
               

               
Conread position:
               
131-490
               

               
Cow position:
               
chr23:34356491-34356858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
39, 121
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr23:5162280-5162660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr23:40443723-40444075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
210, 56
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr23:1337447-1337089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
256, 111
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr23:18902193-18901846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
203, 39
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr23:12091505-12091136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
210, 114
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr23:39813359-39813725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr23:32105726-32106094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
157, 8
               

               
Conread position:
               
131-498
               

               
Cow position:
               
chr23:15287276-15286926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
182, 75
               

               
Conread position:
               
131-498
               

               
Cow position:
               
chr23:33601674-33601314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
211, 127
               

               
Conread position:
               
131-501
               

               
Cow position:
               
chr23:29242804-29243162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
138, 85
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr23:187032-187407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 30
               

               
Conread position:
               
131-513
               

               
Cow position:
               
chr23:2501999-2501620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
131-515
               

               
Cow position:
               
chr23:5617430-5617811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
131-517
               

               
Cow position:
               
chr23:5436790-5436401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
31, 16
               

               
Conread position:
               
131-518
               

               
Cow position:
               
chr23:3247439-3247834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
110, 39
               

               
Conread position:
               
131-529
               

               
Cow position:
               
chr23:349873-349468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
131-944
               

               
Cow position:
               
chr23:1921373-1920559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
39, 116
               

               
Conread position:
               
132-371
               

               
Cow position:
               
chr23:4562740-4562980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
209, 121
               

               
Conread position:
               
132-412
               

               
Cow position:
               
chr23:40648869-40648595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
205, 30
               

               
Conread position:
               
132-471
               

               
Cow position:
               
chr23:1636133-1636466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
71, 114
               

               
Conread position:
               
133-298
               

               
Cow position:
               
chr23:39028636-39028797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr23:11045342-11045527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr23:24867162-24867367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
107, 35
               

               
Conread position:
               
133-408
               

               
Cow position:
               
chr23:14164545-14164265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr23:1742212-1742488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
198, 120
               

               
Conread position:
               
133-409
               

               
Cow position:
               
chr23:18296663-18296938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
133-412
               

               
Cow position:
               
chr23:5706856-5707128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
133-416
               

               
Cow position:
               
chr23:38455326-38455036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
206, 119
               

               
Conread position:
               
133-423
               

               
Cow position:
               
chr23:2799426-2799724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
42, 21
               

               
Conread position:
               
133-426
               

               
Cow position:
               
chr23:5540018-5540298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
192, 37
               

               
Conread position:
               
133-456
               

               
Cow position:
               
chr23:21452875-21452549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-466
               

               
Cow position:
               
chr23:16583059-16582714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
35, 123
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr23:534085-534423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
160, 41
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr23:7845149-7845486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
181, 40
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr23:29626271-29626624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr23:39752974-39753299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
203, 35
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr23:34315109-34314753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 228
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr23:1583387-1583719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
207, 42
               

               
Conread position:
               
133-484
               

               
Cow position:
               
chr23:1776773-1776442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr23:1883249-1883604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 38
               

               
Conread position:
               
133-487
               

               
Cow position:
               
chr23:1290152-1290520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr23:38973698-38974054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
29, 130
               

               
Conread position:
               
133-494
               

               
Cow position:
               
chr23:35239202-35239570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
133-497
               

               
Cow position:
               
chr23:5426287-5426662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
208, 42
               

               
Conread position:
               
133-509
               

               
Cow position:
               
chr23:26986415-26986035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
204, 35
               

               
Conread position:
               
133-515
               

               
Cow position:
               
chr23:8063413-8063769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
362, 11
               

               
Conread position:
               
134-321
               

               
Cow position:
               
chr23:25378511-25378690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
179, 112
               

               
Conread position:
               
134-389
               

               
Cow position:
               
chr23:18402432-18402177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
207, 102
               

               
Conread position:
               
134-394
               

               
Cow position:
               
chr23:27544686-27544946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
34, 41
               

               
Conread position:
               
134-437
               

               
Cow position:
               
chr23:20057009-20056718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
134-475
               

               
Cow position:
               
chr23:24509559-24509886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
253, 36
               

               
Conread position:
               
134-484
               

               
Cow position:
               
chr23:25864830-25864483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
161, 27
               

               
Conread position:
               
134-492
               

               
Cow position:
               
chr23:1655747-1656115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
28, 116
               

               
Conread position:
               
134-495
               

               
Cow position:
               
chr23:40781183-40781533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
117, 36
               

               
Conread position:
               
134-502
               

               
Cow position:
               
chr23:4529026-4528645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
134-515
               

               
Cow position:
               
chr23:39778263-39778636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
207, 36
               

               
Conread position:
               
135-337
               

               
Cow position:
               
chr23:2055564-2055760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
176, 35
               

               
Conread position:
               
135-339
               

               
Cow position:
               
chr23:4329823-4329617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
135-495
               

               
Cow position:
               
chr23:10829724-10829358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
32, 59
               

               
Conread position:
               
135-495
               

               
Cow position:
               
chr23:25675837-25675476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
206, 26
               

               
Conread position:
               
135-498
               

               
Cow position:
               
chr23:19221794-19221412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 113
               

               
Conread position:
               
135-502
               

               
Cow position:
               
chr23:4646375-4646739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
135-545
               

               
Cow position:
               
chr23:31601596-31601176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
32, 116
               

               
Conread position:
               
136-307
               

               
Cow position:
               
chr23:3955269-3955444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 113
               

               
Conread position:
               
136-363
               

               
Cow position:
               
chr23:1647478-1647703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
201, 34
               

               
Conread position:
               
136-491
               

               
Cow position:
               
chr23:40778125-40778481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
203, 106
               

               
Conread position:
               
138-461
               

               
Cow position:
               
chr23:29471263-29470953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
240, 64
               

               
Conread position:
               
138-464
               

               
Cow position:
               
chr23:1536185-1536511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
139-471
               

               
Cow position:
               
chr23:20195055-20194732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
203, 107
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr23:10852911-10853249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
39, 110
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr23:16881300-16880969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
139-495
               

               
Cow position:
               
chr23:26795048-26794689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
139-499
               

               
Cow position:
               
chr23:6244721-6244375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
140-488
               

               
Cow position:
               
chr23:35938205-35938543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
140-507
               

               
Cow position:
               
chr23:5600415-5600786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
160, 116
               

               
Conread position:
               
141-493
               

               
Cow position:
               
chr23:14394532-14394887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr23:18802409-18802045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
141-533
               

               
Cow position:
               
chr23:5437134-5436736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
200, 97
               

               
Conread position:
               
144-492
               

               
Cow position:
               
chr23:5732417-5732753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
197, 26
               

               
Conread position:
               
146-470
               

               
Cow position:
               
chr23:8923476-8923796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
191, 42
               

               
Conread position:
               
147-490
               

               
Cow position:
               
chr23:11081128-11081475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
189, 39
               

               
Conread position:
               
149-520
               

               
Cow position:
               
chr23:3890694-3890328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
150-310
               

               
Cow position:
               
chr23:9713189-9713351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
150-485
               

               
Cow position:
               
chr23:40789851-40790176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
144, 20
               

               
Conread position:
               
151-472
               

               
Cow position:
               
chr23:5795352-5795675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
109, 22
               

               
Conread position:
               
154-475
               

               
Cow position:
               
chr23:9226151-9226476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 140
               

               
Conread position:
               
154-486
               

               
Cow position:
               
chr23:1438174-1438491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
290, 16
               

               
Conread position:
               
161-437
               

               
Cow position:
               
chr23:306408-306689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 28
               

               
Conread position:
               
161-471
               

               
Cow position:
               
chr23:283505-283204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
9, 32
               

               
Conread position:
               
162-494
               

               
Cow position:
               
chr23:307342-307681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
162-504
               

               
Cow position:
               
chr23:39573372-39573032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
164-445
               

               
Cow position:
               
chr23:1701055-1701346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
7, 108
               

               
Conread position:
               
164-471
               

               
Cow position:
               
chr23:3522639-3522941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
177, 25
               

               
Conread position:
               
164-496
               

               
Cow position:
               
chr23:11212392-11212725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
169, 93
               

               
Conread position:
               
165-494
               

               
Cow position:
               
chr23:30585774-30585428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
74, 119
               

               
Conread position:
               
170-490
               

               
Cow position:
               
chr23:24685144-24685459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
166, 68
               

               
Conread position:
               
175-463
               

               
Cow position:
               
chr23:15280601-15280305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
175-471
               

               
Cow position:
               
chr23:1222342-1222043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
166, 65
               

               
Conread position:
               
185-409
               

               
Cow position:
               
chr23:29069535-29069308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
155, 61
               

               
Conread position:
               
195-445
               

               
Cow position:
               
chr23:14651787-14651536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 46
               

               
Conread position:
               
195-456
               

               
Cow position:
               
chr23:17486909-17486644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
79, 42
               

               
Conread position:
               
195-465
               

               
Cow position:
               
chr23:18238609-18238332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
118, 54
               

               
Conread position:
               
195-471
               

               
Cow position:
               
chr23:385395-385110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
35, 65
               

               
Conread position:
               
195-511
               

               
Cow position:
               
chr23:3293609-3293928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
196-476
               

               
Cow position:
               
chr23:40391395-40391678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
145, 24
               

               
Conread position:
               
199-490
               

               
Cow position:
               
chr23:5881597-5881304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
142, 48
               

               
Conread position:
               
201-500
               

               
Cow position:
               
chr23:15741439-15741143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
191, 24
               

               
Conread position:
               
201-506
               

               
Cow position:
               
chr23:20539306-20539609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
138, 57
               

               
Conread position:
               
203-549
               

               
Cow position:
               
chr23:41348702-41348349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
205-495
               

               
Cow position:
               
chr23:40348716-40348424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
136, 41
               

               
Conread position:
               
207-484
               

               
Cow position:
               
chr23:16961225-16961497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
35, 42
               

               
Conread position:
               
207-496
               

               
Cow position:
               
chr23:22414377-22414088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
51, 195
               

               
Conread position:
               
209-495
               

               
Cow position:
               
chr23:35965074-35965370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 279
               

               
Conread position:
               
213-486
               

               
Cow position:
               
chr23:19565384-19565660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 33
               

               
Conread position:
               
216-496
               

               
Cow position:
               
chr23:24966526-24966238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
226-496
               

               
Cow position:
               
chr23:2470944-2471228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
233-531
               

               
Cow position:
               
chr23:4003595-4003909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
239-496
               

               
Cow position:
               
chr23:18384681-18384941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
98, 29
               

               
Conread position:
               
249-484
               

               
Cow position:
               
chr23:20615360-20615137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
5, 103
               

               
Conread position:
               
250-472
               

               
Cow position:
               
chr23:10497669-10497895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 15
               

               
Conread position:
               
253-464
               

               
Cow position:
               
chr23:3234810-3234587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
253-496
               

               
Cow position:
               
chr23:8698391-8698649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
254-493
               

               
Cow position:
               
chr23:16690096-16689846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 246
               

               
Conread position:
               
255-594
               

               
Cow position:
               
chr23:20093268-20092923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
256-492
               

               
Cow position:
               
chr23:7709765-7709999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
85, 148
               

               
Conread position:
               
260-469
               

               
Cow position:
               
chr23:39267763-39267981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
263-493
               

               
Cow position:
               
chr23:16447705-16447473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
270-475
               

               
Cow position:
               
chr23:18739476-18739259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
270-518
               

               
Cow position:
               
chr23:16744535-16744792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
271-484
               

               
Cow position:
               
chr23:17597416-17597633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 180
               

               
Conread position:
               
271-486
               

               
Cow position:
               
chr23:1194502-1194283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
70, 133
               

               
Conread position:
               
272-475
               

               
Cow position:
               
chr23:35656402-35656611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
69, 29
               

               
Conread position:
               
272-496
               

               
Cow position:
               
chr23:32621274-32621511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
273-470
               

               
Cow position:
               
chr23:40501106-40500900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
277-544
               

               
Cow position:
               
chr23:27848992-27849269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 177
               

               
Conread position:
               
289-466
               

               
Cow position:
               
chr23:4343489-4343677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
24, 30
               

               
Conread position:
               
289-475
               

               
Cow position:
               
chr23:24718794-24718601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
297-482
               

               
Cow position:
               
chr23:2110799-2110987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
338-485
               

               
Cow position:
               
chr23:16664340-16664191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
338-487
               

               
Cow position:
               
chr23:20725626-20725478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
338-496
               

               
Cow position:
               
chr23:25968482-25968637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 54
               

               
Conread position:
               
339-508
               

               
Cow position:
               
chr23:4844677-4844845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
342-514
               

               
Cow position:
               
chr23:21539220-21539395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 152
               

               
Conread position:
               
398-968
               

               
Cow position:
               
chr23:20217407-20216845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
401-518
               

               
Cow position:
               
chr23:32412260-32412373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
469-1068
               

               
Cow position:
               
chr23:16171181-16170571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 20
               

               
Conread position:
               
470-1013
               

               
Cow position:
               
chr23:25409286-25408747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
470-1042
               

               
Cow position:
               
chr23:9546852-9546285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 49
               

               
Conread position:
               
471-1029
               

               
Cow position:
               
chr23:23285550-23285033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
252, 45
               

               
Conread position:
               
480-760
               

               
Cow position:
               
chr23:6963903-6964172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
65, 33
               

               
Conread position:
               
515-769
               

               
Cow position:
               
chr23:23917295-23917035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
540-806
               

               
Cow position:
               
chr23:36674381-36674644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 14
               

               
Conread position:
               
540-947
               

               
Cow position:
               
chr23:25078798-25079201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 17
               

               
Conread position:
               
553-822
               

               
Cow position:
               
chr23:39069844-39070111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
145, 59
               

               
Conread position:
               
555-1035
               

               
Cow position:
               
chr23:7253459-7252955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 40
               

               
Conread position:
               
556-854
               

               
Cow position:
               
chr23:30127583-30127891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 235
               

               
Conread position:
               
557-807
               

               
Cow position:
               
chr23:24400816-24401083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 92
               

               
Conread position:
               
557-819
               

               
Cow position:
               
chr23:30572445-30572701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
161, 46
               

               
Conread position:
               
557-948
               

               
Cow position:
               
chr23:5265142-5265535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 46
               

               
Conread position:
               
698-1045
               

               
Cow position:
               
chr23:3715987-3715652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
167, 11
               

               
Conread position:
               
701-1047
               

               
Cow position:
               
chr23:2436104-2436442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
147, 113
               

               
Conread position:
               
704-918
               

               
Cow position:
               
chr23:15054297-15054078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
101, 21
               

               
Conread position:
               
705-912
               

               
Cow position:
               
chr23:15694583-15694376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
131, 13
               

               
Conread position:
               
712-1035
               

               
Cow position:
               
chr23:38249090-38248783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
303, 130
               

               
Conread position:
               
720-954
               

               
Cow position:
               
chr23:7751409-7751172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
131, 22
               

               
Conread position:
               
720-1042
               

               
Cow position:
               
chr23:30745367-30745700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
135, 54
               

               
Conread position:
               
720-1047
               

               
Cow position:
               
chr23:614707-615024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 8
               

               
Conread position:
               
721-905
               

               
Cow position:
               
chr23:29104062-29104253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
722-997
               

               
Cow position:
               
chr23:1083285-1083571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
127, 20
               

               
Conread position:
               
726-1039
               

               
Cow position:
               
chr23:21631427-21631107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
729-1023
               

               
Cow position:
               
chr23:11069408-11069119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
120, 49
               

               
Conread position:
               
748-931
               

               
Cow position:
               
chr23:38026634-38026823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
760-901
               

               
Cow position:
               
chr23:23916759-23916611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
762-1006
               

               
Cow position:
               
chr23:8737660-8737917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
804-1041
               

               
Cow position:
               
chr23:7063392-7063628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
62, 43
               
Show alignments to all cow chromosomes.