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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10225B12.5
        

               
Conread position:
               
114-475
               

               
Cow position:
               
chr25:20523400-20523041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 59
               

               
Conread position:
               
117-463
               

               
Cow position:
               
chr25:20402879-20402524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 14
               

               
Conread position:
               
117-471
               

               
Cow position:
               
chr25:5846966-5846612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
219, 14
               

               
Conread position:
               
118-499
               

               
Cow position:
               
chr25:26136983-26136600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
124, 7
               

               
Conread position:
               
124-471
               

               
Cow position:
               
chr25:14512954-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
125-456
               

               
Cow position:
               
chr25:17190902-17190576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
10, 25
               

               
Conread position:
               
128-471
               

               
Cow position:
               
chr25:26338297-26338653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
158, 114
               

               
Conread position:
               
129-506
               

               
Cow position:
               
chr25:33457582-33457953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
111, 19
               

               
Conread position:
               
130-488
               

               
Cow position:
               
chr25:15410066-15409711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
213, 126
               

               
Conread position:
               
131-256
               

               
Cow position:
               
chr25:10365901-10365779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
131-297
               

               
Cow position:
               
chr25:5514860-5515025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
131-297
               

               
Cow position:
               
chr25:9961323-9961162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
47, 117
               

               
Conread position:
               
131-297
               

               
Cow position:
               
chr25:16001674-16001514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-297
               

               
Cow position:
               
chr25:23323054-23323211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
131-312
               

               
Cow position:
               
chr25:26270084-26269911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
108, 61
               

               
Conread position:
               
131-334
               

               
Cow position:
               
chr25:9957190-9956990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr25:19317109-19317318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
131-380
               

               
Cow position:
               
chr25:8961624-8961870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 31
               

               
Conread position:
               
131-380
               

               
Cow position:
               
chr25:20133462-20133215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr25:18905735-18905989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
210, 107
               

               
Conread position:
               
131-385
               

               
Cow position:
               
chr25:25861506-25861247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 41
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr25:18564339-18564594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
210, 104
               

               
Conread position:
               
131-394
               

               
Cow position:
               
chr25:6687800-6688058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
202, 27
               

               
Conread position:
               
131-400
               

               
Cow position:
               
chr25:15440930-15440657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 171
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr25:10218200-10217922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
31, 110
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr25:18894869-18894600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
219, 40
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr25:36017388-36017663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
124, 39
               

               
Conread position:
               
131-410
               

               
Cow position:
               
chr25:21895036-21894757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr25:33978366-33978081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
131-418
               

               
Cow position:
               
chr25:3145694-3145980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
210, 104
               

               
Conread position:
               
131-428
               

               
Cow position:
               
chr25:18988230-18988530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
28, 126
               

               
Conread position:
               
131-446
               

               
Cow position:
               
chr25:41132508-41132198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
182, 113
               

               
Conread position:
               
131-455
               

               
Cow position:
               
chr25:16867083-16867422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 35
               

               
Conread position:
               
131-468
               

               
Cow position:
               
chr25:7380990-7380648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 77
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr25:11315760-11316095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr25:11585372-11585722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
210, 38
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr25:17658463-17658806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
206, 58
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr25:21893188-21893528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
210, 16
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr25:24651601-24651263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
200, 116
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr25:30462449-30462127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 94
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr25:7216681-7217014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
210, 39
               

               
Conread position:
               
131-482
               

               
Cow position:
               
chr25:21289194-21289553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
36, 109
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr25:17704603-17704945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
210, 80
               

               
Conread position:
               
131-485
               

               
Cow position:
               
chr25:21245757-21245386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
41, 118
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr25:17914630-17914993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
131-491
               

               
Cow position:
               
chr25:9002525-9002881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
206, 102
               

               
Conread position:
               
131-492
               

               
Cow position:
               
chr25:13380762-13380384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
172, 121
               

               
Conread position:
               
131-493
               

               
Cow position:
               
chr25:1838087-1838458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
166, 115
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr25:26087369-26087734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr25:30618916-30619285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
210, 38
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr25:18294467-18294094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 106
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr25:12755642-12755270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
131-497
               

               
Cow position:
               
chr25:6474245-6473861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 41
               

               
Conread position:
               
131-514
               

               
Cow position:
               
chr25:7750305-7750687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
131-517
               

               
Cow position:
               
chr25:20069574-20069955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
203, 39
               

               
Conread position:
               
131-518
               

               
Cow position:
               
chr25:22203835-22203445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
261, 83
               

               
Conread position:
               
132-475
               

               
Cow position:
               
chr25:21191342-21191674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
132-484
               

               
Cow position:
               
chr25:14720606-14720938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
132-502
               

               
Cow position:
               
chr25:12097697-12098060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 22
               

               
Conread position:
               
133-255
               

               
Cow position:
               
chr25:36026860-36026982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
133-290
               

               
Cow position:
               
chr25:7329400-7329553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
133-307
               

               
Cow position:
               
chr25:35333010-35333181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
167, 108
               

               
Conread position:
               
133-335
               

               
Cow position:
               
chr25:13672244-13672444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 116
               

               
Conread position:
               
133-379
               

               
Cow position:
               
chr25:36036928-36036680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
179, 37
               

               
Conread position:
               
133-382
               

               
Cow position:
               
chr25:6961301-6961052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
204, 21
               

               
Conread position:
               
133-445
               

               
Cow position:
               
chr25:788117-788424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
133-454
               

               
Cow position:
               
chr25:40321437-40321120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
115, 36
               

               
Conread position:
               
133-461
               

               
Cow position:
               
chr25:17342305-17342644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr25:6683209-6682858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
208, 15
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr25:33550361-33550703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
213, 35
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr25:6996634-6996978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 96
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr25:9269210-9269533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
205, 21
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr25:13272425-13272762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
180, 35
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr25:21668098-21668441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
140, 40
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr25:10643454-10643119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
208, 80
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr25:21193088-21192744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 40
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr25:36746590-36746251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
206, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr25:41151108-41150767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
208, 28
               

               
Conread position:
               
133-484
               

               
Cow position:
               
chr25:8120632-8120987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
26, 38
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr25:448315-447957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
167, 111
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr25:7007767-7008125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
133-486
               

               
Cow position:
               
chr25:26089962-26089618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
133-487
               

               
Cow position:
               
chr25:4521982-4521632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
198, 37
               

               
Conread position:
               
133-487
               

               
Cow position:
               
chr25:19679198-19679561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 37
               

               
Conread position:
               
133-494
               

               
Cow position:
               
chr25:24572923-24573276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
63, 21
               

               
Conread position:
               
133-495
               

               
Cow position:
               
chr25:20785732-20785372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 23
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr25:3992646-3993001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
164, 40
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr25:30319597-30319231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 120
               

               
Conread position:
               
133-499
               

               
Cow position:
               
chr25:30852609-30852984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
134-322
               

               
Cow position:
               
chr25:36535584-36535397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
134-339
               

               
Cow position:
               
chr25:12081469-12081269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
134-339
               

               
Cow position:
               
chr25:17144277-17144481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
134-420
               

               
Cow position:
               
chr25:28188095-28187804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
134-445
               

               
Cow position:
               
chr25:11661963-11661660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
134-472
               

               
Cow position:
               
chr25:16319277-16318956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
207, 34
               

               
Conread position:
               
134-479
               

               
Cow position:
               
chr25:14791607-14791956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
135-297
               

               
Cow position:
               
chr25:32588025-32587867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
135-298
               

               
Cow position:
               
chr25:12204322-12204488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
135-312
               

               
Cow position:
               
chr25:36779350-36779527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
135-408
               

               
Cow position:
               
chr25:31230381-31230119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
254, 38
               

               
Conread position:
               
135-463
               

               
Cow position:
               
chr25:17566439-17566776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
135-467
               

               
Cow position:
               
chr25:6470362-6470017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
168, 19
               

               
Conread position:
               
135-470
               

               
Cow position:
               
chr25:22297164-22296821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
186, 38
               

               
Conread position:
               
135-471
               

               
Cow position:
               
chr25:36081731-36082061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
105, 35
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr25:19129707-19130051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr25:38135601-38135950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
178, 35
               

               
Conread position:
               
135-483
               

               
Cow position:
               
chr25:26700891-26701225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
199, 35
               

               
Conread position:
               
135-494
               

               
Cow position:
               
chr25:22315057-22315420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
124, 38
               

               
Conread position:
               
135-495
               

               
Cow position:
               
chr25:26679082-26679441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr25:5920792-5921163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 127
               

               
Conread position:
               
135-522
               

               
Cow position:
               
chr25:26259637-26259272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
136-338
               

               
Cow position:
               
chr25:12840875-12840666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
34, 141
               

               
Conread position:
               
136-339
               

               
Cow position:
               
chr25:41107611-41107807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
136-470
               

               
Cow position:
               
chr25:20007990-20008326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
172, 34
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr25:14833803-14833471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
208, 34
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr25:18721260-18720930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
136-494
               

               
Cow position:
               
chr25:11066293-11065922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
137-446
               

               
Cow position:
               
chr25:16064745-16065050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
204, 105
               

               
Conread position:
               
137-463
               

               
Cow position:
               
chr25:20023533-20023209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
204, 23
               

               
Conread position:
               
137-471
               

               
Cow position:
               
chr25:16921934-16921600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
204, 33
               

               
Conread position:
               
137-508
               

               
Cow position:
               
chr25:26133894-26134275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 109
               

               
Conread position:
               
138-298
               

               
Cow position:
               
chr25:12997449-12997607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 105
               

               
Conread position:
               
138-472
               

               
Cow position:
               
chr25:7641593-7641261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
194, 32
               

               
Conread position:
               
138-507
               

               
Cow position:
               
chr25:6464177-6463800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
139-471
               

               
Cow position:
               
chr25:22730691-22731018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
24, 49
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr25:24669578-24669255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
139-495
               

               
Cow position:
               
chr25:26654767-26655109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 117
               

               
Conread position:
               
140-297
               

               
Cow position:
               
chr25:12824162-12824006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
140-379
               

               
Cow position:
               
chr25:20216692-20216931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
109, 114
               

               
Conread position:
               
140-493
               

               
Cow position:
               
chr25:33686820-33686466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
173, 34
               

               
Conread position:
               
141-307
               

               
Cow position:
               
chr25:36761966-36762126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 66
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr25:7011113-7010752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
143-479
               

               
Cow position:
               
chr25:27801151-27801479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
190, 17
               

               
Conread position:
               
144-475
               

               
Cow position:
               
chr25:9843041-9843378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
197, 12
               

               
Conread position:
               
144-495
               

               
Cow position:
               
chr25:36020268-36020627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
156, 98
               

               
Conread position:
               
145-469
               

               
Cow position:
               
chr25:36835560-36835241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 47
               

               
Conread position:
               
147-445
               

               
Cow position:
               
chr25:15634610-15634299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
20, 109
               

               
Conread position:
               
147-464
               

               
Cow position:
               
chr25:22756475-22756798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
194, 99
               

               
Conread position:
               
147-493
               

               
Cow position:
               
chr25:11436940-11436609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
153-486
               

               
Cow position:
               
chr25:1762968-1763292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
186, 35
               

               
Conread position:
               
154-475
               

               
Cow position:
               
chr25:4488793-4489100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
182, 16
               

               
Conread position:
               
154-487
               

               
Cow position:
               
chr25:6292440-6292778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
183, 92
               

               
Conread position:
               
154-518
               

               
Cow position:
               
chr25:18202053-18201690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
159, 98
               

               
Conread position:
               
161-495
               

               
Cow position:
               
chr25:30816764-30817110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
161-499
               

               
Cow position:
               
chr25:33664022-33663689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
161-510
               

               
Cow position:
               
chr25:26225146-26224808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
180, 82
               

               
Conread position:
               
162-470
               

               
Cow position:
               
chr25:33557154-33557458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
212, 84
               

               
Conread position:
               
163-495
               

               
Cow position:
               
chr25:17119626-17119960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
120, 61
               

               
Conread position:
               
163-496
               

               
Cow position:
               
chr25:9315902-9316242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
170-487
               

               
Cow position:
               
chr25:1824207-1823882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
171, 45
               

               
Conread position:
               
170-496
               

               
Cow position:
               
chr25:18487559-18487891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
171, 67
               

               
Conread position:
               
175-407
               

               
Cow position:
               
chr25:12252919-12252681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 134
               

               
Conread position:
               
175-469
               

               
Cow position:
               
chr25:19364167-19363869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
166, 75
               

               
Conread position:
               
175-471
               

               
Cow position:
               
chr25:36555796-36555506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
175-499
               

               
Cow position:
               
chr25:11433060-11432733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 248
               

               
Conread position:
               
175-523
               

               
Cow position:
               
chr25:17474618-17474268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
160, 13
               

               
Conread position:
               
176-463
               

               
Cow position:
               
chr25:13443519-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 66
               

               
Conread position:
               
182-429
               

               
Cow position:
               
chr25:30449942-30450186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
208, 64
               

               
Conread position:
               
186-500
               

               
Cow position:
               
chr25:12305179-12305501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
10, 75
               

               
Conread position:
               
193-492
               

               
Cow position:
               
chr25:11956718-11957018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
148, 16
               

               
Conread position:
               
194-491
               

               
Cow position:
               
chr25:37594316-37594598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
195-454
               

               
Cow position:
               
chr25:23245089-23244828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
22, 14
               

               
Conread position:
               
195-471
               

               
Cow position:
               
chr25:7799466-7799745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
135, 49
               

               
Conread position:
               
196-459
               

               
Cow position:
               
chr25:12806958-12807224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
135, 50
               

               
Conread position:
               
196-492
               

               
Cow position:
               
chr25:13621445-13621146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
134, 62
               

               
Conread position:
               
197-445
               

               
Cow position:
               
chr25:15714788-15715039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
198-475
               

               
Cow position:
               
chr25:35052705-35052421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
100, 48
               

               
Conread position:
               
203-496
               

               
Cow position:
               
chr25:433128-432831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 42
               

               
Conread position:
               
207-502
               

               
Cow position:
               
chr25:8346077-8345775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
134, 44
               

               
Conread position:
               
208-475
               

               
Cow position:
               
chr25:35762516-35762785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
125, 40
               

               
Conread position:
               
216-469
               

               
Cow position:
               
chr25:1840255-1840512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
229-469
               

               
Cow position:
               
chr25:26306259-26306012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
112, 18
               

               
Conread position:
               
230-472
               

               
Cow position:
               
chr25:17403432-17403670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
231-538
               

               
Cow position:
               
chr25:36716868-36717166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
248-469
               

               
Cow position:
               
chr25:22298598-22298823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
250-486
               

               
Cow position:
               
chr25:13222863-13223108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
5, 219
               

               
Conread position:
               
251-485
               

               
Cow position:
               
chr25:40904865-40904618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
251-500
               

               
Cow position:
               
chr25:7726627-7726886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
90, 234
               

               
Conread position:
               
252-459
               

               
Cow position:
               
chr25:9107558-9107352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
252-496
               

               
Cow position:
               
chr25:13826402-13826651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
89, 23
               

               
Conread position:
               
254-515
               

               
Cow position:
               
chr25:35109301-35109039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
87, 137
               

               
Conread position:
               
255-470
               

               
Cow position:
               
chr25:9990141-9989910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
255-498
               

               
Cow position:
               
chr25:9025095-9025345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
56, 16
               

               
Conread position:
               
258-471
               

               
Cow position:
               
chr25:18288796-18288577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
258-475
               

               
Cow position:
               
chr25:33555579-33555805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
259-504
               

               
Cow position:
               
chr25:40682711-40682961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
260-466
               

               
Cow position:
               
chr25:35339216-35339002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
261-469
               

               
Cow position:
               
chr25:26072582-26072372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
262-483
               

               
Cow position:
               
chr25:36873357-36873135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 129
               

               
Conread position:
               
269-475
               

               
Cow position:
               
chr25:33101622-33101416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
274-496
               

               
Cow position:
               
chr25:20202901-20203125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 117
               

               
Conread position:
               
275-472
               

               
Cow position:
               
chr25:31514170-31514378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
275-487
               

               
Cow position:
               
chr25:5807934-5808157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
38, 44
               

               
Conread position:
               
281-499
               

               
Cow position:
               
chr25:31657282-31657062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
283-486
               

               
Cow position:
               
chr25:28945017-28945224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 162
               

               
Conread position:
               
287-525
               

               
Cow position:
               
chr25:14164200-14164446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
287-546
               

               
Cow position:
               
chr25:36369820-36370095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
287-546
               

               
Cow position:
               
chr25:36375511-36375786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
295-483
               

               
Cow position:
               
chr25:15349896-15349702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
302-496
               

               
Cow position:
               
chr25:22565942-22565746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
49, 144
               

               
Conread position:
               
338-490
               

               
Cow position:
               
chr25:4157189-4157035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
338-529
               

               
Cow position:
               
chr25:28940084-28939890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
46, 174
               

               
Conread position:
               
470-930
               

               
Cow position:
               
chr25:16240167-16240603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 39
               

               
Conread position:
               
471-818
               

               
Cow position:
               
chr25:13123676-13123319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
472-770
               

               
Cow position:
               
chr25:23014613-23014315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
478-796
               

               
Cow position:
               
chr25:17473110-17472811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
36, 64
               

               
Conread position:
               
495-668
               

               
Cow position:
               
chr25:11526585-11526760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
515-759
               

               
Cow position:
               
chr25:13704427-13704173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
22, 124
               

               
Conread position:
               
515-766
               

               
Cow position:
               
chr25:16193116-16193372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
24, 138
               

               
Conread position:
               
515-948
               

               
Cow position:
               
chr25:5567336-5567791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
533-1043
               

               
Cow position:
               
chr25:18205913-18206424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 21
               

               
Conread position:
               
540-833
               

               
Cow position:
               
chr25:36235438-36235720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
158, 20
               

               
Conread position:
               
555-1035
               

               
Cow position:
               
chr25:38358466-38357984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 256
               

               
Conread position:
               
618-915
               

               
Cow position:
               
chr25:18643754-18644067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
637-908
               

               
Cow position:
               
chr25:35038346-35038624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
670-997
               

               
Cow position:
               
chr25:14279526-14279187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
684-1041
               

               
Cow position:
               
chr25:30035789-30035428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 38
               

               
Conread position:
               
692-1021
               

               
Cow position:
               
chr25:10013200-10013526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
155, 11
               

               
Conread position:
               
696-902
               

               
Cow position:
               
chr25:27798434-27798228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
699-1024
               

               
Cow position:
               
chr25:34236350-34236679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
701-926
               

               
Cow position:
               
chr25:30614367-30614138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
720-913
               

               
Cow position:
               
chr25:23842457-23842264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
129, 171
               

               
Conread position:
               
720-1040
               

               
Cow position:
               
chr25:13471695-13472008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 31
               

               
Conread position:
               
720-1062
               

               
Cow position:
               
chr25:34639154-34639501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
124, 178
               

               
Conread position:
               
725-968
               

               
Cow position:
               
chr25:17660461-17660210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
120, 177
               

               
Conread position:
               
744-1035
               

               
Cow position:
               
chr25:33785914-33786200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
123, 94
               

               
Conread position:
               
746-1035
               

               
Cow position:
               
chr25:16429862-16430151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 126
               
Show alignments to all cow chromosomes.