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Cow genome map

           
Conread name:
           
Ss1.1-Ova1-OVRM10225B12.5
        

               
Conread position:
               
117-240
               

               
Cow position:
               
chr28:11451619-11451498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
117-475
               

               
Cow position:
               
chr28:11426697-11426344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
218, 14
               

               
Conread position:
               
117-494
               

               
Cow position:
               
chr28:22345864-22346246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
222, 14
               

               
Conread position:
               
120-529
               

               
Cow position:
               
chr28:26327806-26328219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 119
               

               
Conread position:
               
127-297
               

               
Cow position:
               
chr28:4022237-4022406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
5, 116
               

               
Conread position:
               
127-462
               

               
Cow position:
               
chr28:26743472-26743822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
54, 43
               

               
Conread position:
               
127-470
               

               
Cow position:
               
chr28:33163609-33163277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
169, 5
               

               
Conread position:
               
131-258
               

               
Cow position:
               
chr28:16243901-16243775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
131-290
               

               
Cow position:
               
chr28:7590324-7590170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-293
               

               
Cow position:
               
chr28:22170860-22170695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
39, 118
               

               
Conread position:
               
131-294
               

               
Cow position:
               
chr28:9390505-9390348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
131-297
               

               
Cow position:
               
chr28:118194-118032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
131-314
               

               
Cow position:
               
chr28:18354466-18354293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
131-338
               

               
Cow position:
               
chr28:18186412-18186615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr28:21380736-21380941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
131-339
               

               
Cow position:
               
chr28:25806429-25806633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
131-389
               

               
Cow position:
               
chr28:26922507-26922253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
177, 23
               

               
Conread position:
               
131-401
               

               
Cow position:
               
chr28:11752283-11752012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
182, 42
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr28:19222284-19222016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
208, 36
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr28:20313130-20313411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
39, 85
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr28:22321283-22321556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
206, 124
               

               
Conread position:
               
131-408
               

               
Cow position:
               
chr28:27161472-27161191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr28:2752639-2752359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr28:21355084-21355364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 23
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr28:31110148-31109868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
39, 108
               

               
Conread position:
               
131-416
               

               
Cow position:
               
chr28:8022251-8021964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
131-417
               

               
Cow position:
               
chr28:25249212-25249495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
131-420
               

               
Cow position:
               
chr28:18760189-18759912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
169, 45
               

               
Conread position:
               
131-429
               

               
Cow position:
               
chr28:16085181-16085473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
182, 83
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr28:4138812-4138486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 30
               

               
Conread position:
               
131-452
               

               
Cow position:
               
chr28:30303336-30303027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
40, 71
               

               
Conread position:
               
131-456
               

               
Cow position:
               
chr28:12430465-12430792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
132, 39
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr28:4914240-4913900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 136
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr28:21363604-21363932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
211, 37
               

               
Conread position:
               
131-469
               

               
Cow position:
               
chr28:7512730-7512382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
143, 115
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr28:5074651-5074321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
131-471
               

               
Cow position:
               
chr28:23410468-23410134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr28:751086-751429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
34, 116
               

               
Conread position:
               
131-472
               

               
Cow position:
               
chr28:12951286-12951617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
210, 115
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr28:23460006-23460348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
38, 100
               

               
Conread position:
               
131-475
               

               
Cow position:
               
chr28:30746870-30746534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
210, 30
               

               
Conread position:
               
131-483
               

               
Cow position:
               
chr28:3144034-3143672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
54, 198
               

               
Conread position:
               
131-483
               

               
Cow position:
               
chr28:10057734-10057375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 117
               

               
Conread position:
               
131-487
               

               
Cow position:
               
chr28:4881387-4881033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
31, 122
               

               
Conread position:
               
131-489
               

               
Cow position:
               
chr28:28766048-28765687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 121
               

               
Conread position:
               
131-490
               

               
Cow position:
               
chr28:13267643-13267987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
116, 129
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr28:7698123-7697754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
210, 121
               

               
Conread position:
               
131-494
               

               
Cow position:
               
chr28:10681964-10681596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
131-495
               

               
Cow position:
               
chr28:5144664-5144288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 66
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr28:8347588-8347959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 113
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr28:26982885-26982507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
38, 120
               

               
Conread position:
               
131-496
               

               
Cow position:
               
chr28:27218182-27218549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 39
               

               
Conread position:
               
131-500
               

               
Cow position:
               
chr28:33036609-33036257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 30
               

               
Conread position:
               
131-502
               

               
Cow position:
               
chr28:8291293-8291641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
131-505
               

               
Cow position:
               
chr28:13245402-13245797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
13, 131
               

               
Conread position:
               
131-515
               

               
Cow position:
               
chr28:10606773-10606394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
33, 128
               

               
Conread position:
               
131-519
               

               
Cow position:
               
chr28:5826801-5827177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
131-524
               

               
Cow position:
               
chr28:11422953-11422564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
203, 43
               

               
Conread position:
               
132-298
               

               
Cow position:
               
chr28:19222739-19222583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 93
               

               
Conread position:
               
132-409
               

               
Cow position:
               
chr28:19079986-19079712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 96
               

               
Conread position:
               
132-475
               

               
Cow position:
               
chr28:13527062-13527402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
209, 73
               

               
Conread position:
               
132-481
               

               
Cow position:
               
chr28:23616266-23616614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
243, 106
               

               
Conread position:
               
132-489
               

               
Cow position:
               
chr28:25727236-25727584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 73
               

               
Conread position:
               
132-494
               

               
Cow position:
               
chr28:7439104-7439462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
168, 58
               

               
Conread position:
               
132-496
               

               
Cow position:
               
chr28:9812142-9812507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
255, 40
               

               
Conread position:
               
133-321
               

               
Cow position:
               
chr28:2862725-2862910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
133-338
               

               
Cow position:
               
chr28:8408594-8408793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr28:2960972-2960770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
169, 38
               

               
Conread position:
               
133-339
               

               
Cow position:
               
chr28:7549199-7548998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
133-371
               

               
Cow position:
               
chr28:11786853-11786620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
175, 78
               

               
Conread position:
               
133-463
               

               
Cow position:
               
chr28:3914569-3914897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
10, 128
               

               
Conread position:
               
133-469
               

               
Cow position:
               
chr28:24966251-24966584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
207, 36
               

               
Conread position:
               
133-470
               

               
Cow position:
               
chr28:7268076-7267750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
180, 40
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr28:13474162-13474499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
133-471
               

               
Cow position:
               
chr28:22308508-22308844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
208, 80
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr28:3024052-3023715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
209, 37
               

               
Conread position:
               
133-472
               

               
Cow position:
               
chr28:9285514-9285176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
204, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr28:4016398-4016727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr28:5236739-5236391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
208, 59
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr28:10863922-10863596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
210, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr28:11884660-11884327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-475
               

               
Cow position:
               
chr28:21868315-21868661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-485
               

               
Cow position:
               
chr28:11527399-11527045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
198, 37
               

               
Conread position:
               
133-491
               

               
Cow position:
               
chr28:10053476-10053114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 129
               

               
Conread position:
               
133-492
               

               
Cow position:
               
chr28:9636593-9636235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-493
               

               
Cow position:
               
chr28:21844819-21845172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
208, 37
               

               
Conread position:
               
133-494
               

               
Cow position:
               
chr28:4884403-4884032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
117, 40
               

               
Conread position:
               
133-494
               

               
Cow position:
               
chr28:21502254-21502605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
32, 41
               

               
Conread position:
               
133-495
               

               
Cow position:
               
chr28:4834982-4834617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
133-496
               

               
Cow position:
               
chr28:11866806-11866441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
10, 38
               

               
Conread position:
               
133-497
               

               
Cow position:
               
chr28:20124643-20125007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 37
               

               
Conread position:
               
133-498
               

               
Cow position:
               
chr28:3492925-3492563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
208, 35
               

               
Conread position:
               
133-500
               

               
Cow position:
               
chr28:4158818-4159193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
124, 37
               

               
Conread position:
               
134-298
               

               
Cow position:
               
chr28:22739653-22739811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
134-320
               

               
Cow position:
               
chr28:16253000-16252815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
134-409
               

               
Cow position:
               
chr28:16109802-16110074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
205, 58
               

               
Conread position:
               
134-437
               

               
Cow position:
               
chr28:26103571-26103864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 49
               

               
Conread position:
               
134-469
               

               
Cow position:
               
chr28:5204055-5204383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
207, 21
               

               
Conread position:
               
134-486
               

               
Cow position:
               
chr28:5817702-5818053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
5, 85
               

               
Conread position:
               
134-495
               

               
Cow position:
               
chr28:5224574-5224924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
27, 40
               

               
Conread position:
               
134-495
               

               
Cow position:
               
chr28:9099795-9100151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 56
               

               
Conread position:
               
134-497
               

               
Cow position:
               
chr28:4070830-4071186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
37, 41
               

               
Conread position:
               
134-518
               

               
Cow position:
               
chr28:4308048-4307644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
31, 201
               

               
Conread position:
               
135-378
               

               
Cow position:
               
chr28:32365708-32365949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
135-409
               

               
Cow position:
               
chr28:2132057-2131787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
206, 19
               

               
Conread position:
               
135-425
               

               
Cow position:
               
chr28:25728060-25728348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
207, 111
               

               
Conread position:
               
135-469
               

               
Cow position:
               
chr28:10745071-10745414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 113
               

               
Conread position:
               
135-472
               

               
Cow position:
               
chr28:23007872-23007541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 35
               

               
Conread position:
               
135-475
               

               
Cow position:
               
chr28:19262727-19262380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
109, 98
               

               
Conread position:
               
135-485
               

               
Cow position:
               
chr28:5437226-5436872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
206, 33
               

               
Conread position:
               
135-485
               

               
Cow position:
               
chr28:34430561-34430207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
216, 105
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr28:23724593-23724254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
173, 36
               

               
Conread position:
               
135-486
               

               
Cow position:
               
chr28:27313883-27313512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
36, 92
               

               
Conread position:
               
135-494
               

               
Cow position:
               
chr28:9426490-9426129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
26, 54
               

               
Conread position:
               
135-496
               

               
Cow position:
               
chr28:30293729-30293362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 115
               

               
Conread position:
               
135-518
               

               
Cow position:
               
chr28:15263859-15263471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 128
               

               
Conread position:
               
135-524
               

               
Cow position:
               
chr28:24693137-24693528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
24, 59
               

               
Conread position:
               
136-297
               

               
Cow position:
               
chr28:19024000-19024163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
136-311
               

               
Cow position:
               
chr28:28903807-28903631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
136-409
               

               
Cow position:
               
chr28:19026149-19025872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
97, 34
               

               
Conread position:
               
136-472
               

               
Cow position:
               
chr28:25056833-25057157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
219, 37
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr28:4282627-4282285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
203, 47
               

               
Conread position:
               
136-475
               

               
Cow position:
               
chr28:7009112-7008777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
177, 33
               

               
Conread position:
               
136-486
               

               
Cow position:
               
chr28:3078818-3078484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
205, 35
               

               
Conread position:
               
136-496
               

               
Cow position:
               
chr28:16919297-16918949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
196, 37
               

               
Conread position:
               
137-341
               

               
Cow position:
               
chr28:3256661-3256860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
137-471
               

               
Cow position:
               
chr28:5931216-5931544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
90, 56
               

               
Conread position:
               
137-471
               

               
Cow position:
               
chr28:20409256-20409591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
137-475
               

               
Cow position:
               
chr28:29416849-29416521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
199, 33
               

               
Conread position:
               
137-486
               

               
Cow position:
               
chr28:616248-616584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
176, 32
               

               
Conread position:
               
138-379
               

               
Cow position:
               
chr28:21598389-21598144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
190, 32
               

               
Conread position:
               
138-484
               

               
Cow position:
               
chr28:4090183-4089848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
201, 35
               

               
Conread position:
               
138-494
               

               
Cow position:
               
chr28:3449164-3449534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
30, 105
               

               
Conread position:
               
139-307
               

               
Cow position:
               
chr28:5553077-5552912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
139-333
               

               
Cow position:
               
chr28:7751431-7751247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
139-469
               

               
Cow position:
               
chr28:22323133-22323457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
237, 105
               

               
Conread position:
               
139-471
               

               
Cow position:
               
chr28:24082133-24082470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
139-475
               

               
Cow position:
               
chr28:5684576-5684904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
139-490
               

               
Cow position:
               
chr28:23296190-23296539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
39, 10
               

               
Conread position:
               
139-498
               

               
Cow position:
               
chr28:34230096-34230459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
198, 88
               

               
Conread position:
               
139-518
               

               
Cow position:
               
chr28:5199684-5200072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
19, 116
               

               
Conread position:
               
139-533
               

               
Cow position:
               
chr28:8787405-8787799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 34
               

               
Conread position:
               
140-475
               

               
Cow position:
               
chr28:25701001-25700666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
140-487
               

               
Cow position:
               
chr28:5193187-5193541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
116, 7
               

               
Conread position:
               
141-472
               

               
Cow position:
               
chr28:11079175-11079501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
157, 7
               

               
Conread position:
               
141-476
               

               
Cow position:
               
chr28:8140350-8140689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
200, 29
               

               
Conread position:
               
144-475
               

               
Cow position:
               
chr28:11346614-11346285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
197, 93
               

               
Conread position:
               
145-491
               

               
Cow position:
               
chr28:25973405-25973762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
94, 102
               

               
Conread position:
               
145-518
               

               
Cow position:
               
chr28:30234263-30234634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
168, 97
               

               
Conread position:
               
146-469
               

               
Cow position:
               
chr28:12672588-12672263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
167, 25
               

               
Conread position:
               
148-297
               

               
Cow position:
               
chr28:19394491-19394637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 45
               

               
Conread position:
               
158-469
               

               
Cow position:
               
chr28:25128768-25129082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
183, 15
               

               
Conread position:
               
161-471
               

               
Cow position:
               
chr28:19564341-19564035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
161-503
               

               
Cow position:
               
chr28:23447936-23447603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 10
               

               
Conread position:
               
162-389
               

               
Cow position:
               
chr28:5166654-5166882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 84
               

               
Conread position:
               
162-475
               

               
Cow position:
               
chr28:3011385-3011063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
75, 85
               

               
Conread position:
               
162-496
               

               
Cow position:
               
chr28:3484465-3484811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
134, 151
               

               
Conread position:
               
164-456
               

               
Cow position:
               
chr28:18370118-18369828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
212, 88
               

               
Conread position:
               
164-472
               

               
Cow position:
               
chr28:12933841-12933535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 75
               

               
Conread position:
               
164-494
               

               
Cow position:
               
chr28:11197781-11197451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
32, 7
               

               
Conread position:
               
165-466
               

               
Cow position:
               
chr28:12363270-12362965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
52, 96
               

               
Conread position:
               
175-494
               

               
Cow position:
               
chr28:6358509-6358186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
166, 22
               

               
Conread position:
               
175-496
               

               
Cow position:
               
chr28:10616054-10615722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
67, 18
               

               
Conread position:
               
178-463
               

               
Cow position:
               
chr28:17071237-17071532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 79
               

               
Conread position:
               
185-445
               

               
Cow position:
               
chr28:11559723-11559459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
154, 24
               

               
Conread position:
               
192-486
               

               
Cow position:
               
chr28:22813178-22813462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
195-464
               

               
Cow position:
               
chr28:4045773-4046037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 29
               

               
Conread position:
               
195-472
               

               
Cow position:
               
chr28:7927095-7927362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
146, 47
               

               
Conread position:
               
195-475
               

               
Cow position:
               
chr28:5139076-5138795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 143
               

               
Conread position:
               
195-487
               

               
Cow position:
               
chr28:1099739-1099461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
146, 17
               

               
Conread position:
               
195-518
               

               
Cow position:
               
chr28:7350578-7350901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
145, 51
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr28:4181926-4182199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
144, 43
               

               
Conread position:
               
198-485
               

               
Cow position:
               
chr28:10589100-10588819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
143, 52
               

               
Conread position:
               
201-475
               

               
Cow position:
               
chr28:3411066-3410785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 201
               

               
Conread position:
               
208-471
               

               
Cow position:
               
chr28:4013020-4013283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
133, 32
               

               
Conread position:
               
208-523
               

               
Cow position:
               
chr28:33322387-33322706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
128, 50
               

               
Conread position:
               
216-459
               

               
Cow position:
               
chr28:16211162-16210913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
216-494
               

               
Cow position:
               
chr28:3445541-3445260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
119, 34
               

               
Conread position:
               
221-463
               

               
Cow position:
               
chr28:26531335-26531089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 48
               

               
Conread position:
               
226-461
               

               
Cow position:
               
chr28:20397419-20397176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
113, 20
               

               
Conread position:
               
227-489
               

               
Cow position:
               
chr28:11815126-11814860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
112, 22
               

               
Conread position:
               
228-475
               

               
Cow position:
               
chr28:5235835-5236078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
241-472
               

               
Cow position:
               
chr28:6975204-6975435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
100, 7
               

               
Conread position:
               
241-483
               

               
Cow position:
               
chr28:17739787-17740039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
100, 60
               

               
Conread position:
               
252-484
               

               
Cow position:
               
chr28:21008692-21008460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 80
               

               
Conread position:
               
252-491
               

               
Cow position:
               
chr28:5254846-5255094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 159
               

               
Conread position:
               
252-495
               

               
Cow position:
               
chr28:5630071-5630325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 104
               

               
Conread position:
               
253-475
               

               
Cow position:
               
chr28:11987148-11987367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
253-475
               

               
Cow position:
               
chr28:12055386-12055605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 140
               

               
Conread position:
               
253-491
               

               
Cow position:
               
chr28:4006761-4007001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 7
               

               
Conread position:
               
254-475
               

               
Cow position:
               
chr28:7132111-7131887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
254-487
               

               
Cow position:
               
chr28:4809754-4809986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 165
               

               
Conread position:
               
254-491
               

               
Cow position:
               
chr28:777650-777897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
256-518
               

               
Cow position:
               
chr28:19128192-19127920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
85, 97
               

               
Conread position:
               
258-469
               

               
Cow position:
               
chr28:17680601-17680823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
51, 61
               

               
Conread position:
               
258-500
               

               
Cow position:
               
chr28:4937263-4937008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
258-501
               

               
Cow position:
               
chr28:8304226-8304473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
264-489
               

               
Cow position:
               
chr28:29850830-29850604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
117, 180
               

               
Conread position:
               
269-515
               

               
Cow position:
               
chr28:6563908-6563653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
44, 223
               

               
Conread position:
               
270-503
               

               
Cow position:
               
chr28:19039028-19038787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
71, 218
               

               
Conread position:
               
271-529
               

               
Cow position:
               
chr28:8396327-8396581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
272-496
               

               
Cow position:
               
chr28:26810672-26810905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
70, 211
               

               
Conread position:
               
274-507
               

               
Cow position:
               
chr28:1655105-1654858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
29, 221
               

               
Conread position:
               
275-475
               

               
Cow position:
               
chr28:30902122-30902325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
66, 120
               

               
Conread position:
               
276-469
               

               
Cow position:
               
chr28:27721699-27721894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
276-503
               

               
Cow position:
               
chr28:5673872-5674104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
277-503
               

               
Cow position:
               
chr28:4163581-4163346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
279-495
               

               
Cow position:
               
chr28:4876443-4876660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
284-488
               

               
Cow position:
               
chr28:9109221-9109428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 105
               

               
Conread position:
               
288-511
               

               
Cow position:
               
chr28:32014793-32015028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
301-507
               

               
Cow position:
               
chr28:22085520-22085309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
316-491
               

               
Cow position:
               
chr28:16200706-16200520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
338-472
               

               
Cow position:
               
chr28:21263221-21263355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
342-502
               

               
Cow position:
               
chr28:5428686-5428531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
463-928
               

               
Cow position:
               
chr28:34346781-34347248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 143
               

               
Conread position:
               
471-902
               

               
Cow position:
               
chr28:22361093-22360663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 18
               

               
Conread position:
               
480-841
               

               
Cow position:
               
chr28:16805013-16805386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
483-792
               

               
Cow position:
               
chr28:15349915-15349604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
484-873
               

               
Cow position:
               
chr28:23390798-23390395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
53, 33
               

               
Conread position:
               
511-707
               

               
Cow position:
               
chr28:480300-480495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
515-707
               

               
Cow position:
               
chr28:31994227-31994418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 63
               

               
Conread position:
               
515-927
               

               
Cow position:
               
chr28:28631001-28630576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 88
               

               
Conread position:
               
535-1035
               

               
Cow position:
               
chr28:22614309-22613817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 16
               

               
Conread position:
               
540-885
               

               
Cow position:
               
chr28:34117482-34117134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 14
               

               
Conread position:
               
540-1042
               

               
Cow position:
               
chr28:2340936-2340422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 16
               

               
Conread position:
               
577-1035
               

               
Cow position:
               
chr28:22830284-22829820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 80
               

               
Conread position:
               
596-1042
               

               
Cow position:
               
chr28:7607572-7607119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 80
               

               
Conread position:
               
600-1035
               

               
Cow position:
               
chr28:22855622-22855195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 120
               

               
Conread position:
               
665-928
               

               
Cow position:
               
chr28:15914974-15915248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
33, 158
               

               
Conread position:
               
703-1035
               

               
Cow position:
               
chr28:6277322-6277654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 15
               

               
Conread position:
               
705-1030
               

               
Cow position:
               
chr28:30371018-30370688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
710-1000
               

               
Cow position:
               
chr28:19962089-19961796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
138, 12
               

               
Conread position:
               
711-1035
               

               
Cow position:
               
chr28:21940403-21940088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
12, 88
               

               
Conread position:
               
711-1051
               

               
Cow position:
               
chr28:20265626-20265272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
711-1057
               

               
Cow position:
               
chr28:15934441-15934765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
11, 56
               

               
Conread position:
               
719-968
               

               
Cow position:
               
chr28:3069142-3068884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 205
               

               
Conread position:
               
719-1021
               

               
Cow position:
               
chr28:16466833-16466529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
721-1035
               

               
Cow position:
               
chr28:16487515-16487193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 286
               

               
Conread position:
               
747-1022
               

               
Cow position:
               
chr28:13936594-13936304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
59, 232
               

               
Conread position:
               
772-1035
               

               
Cow position:
               
chr28:6486759-6486486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
76, 186
               

               
Conread position:
               
772-1041
               

               
Cow position:
               
chr28:26626979-26627256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 154
               

               
Conread position:
               
792-1042
               

               
Cow position:
               
chr28:11379896-11380151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
38, 33
               
Show alignments to all cow chromosomes.