Cow genome map

Conread name: Ss1.1-Ova1-OVRM1H090179.5

Conread position: 212-354
Cow position: chr1:4264770-4264623 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 21

Conread position: 212-363
Cow position: chr1:94761492-94761341 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 21

Conread position: 212-391
Cow position: chr1:93391855-93392033 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 123, 22

Conread position: 212-393
Cow position: chr1:13313928-13314114 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 80, 21

Conread position: 212-463
Cow position: chr1:67902293-67902056 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 179
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 21

Conread position: 212-465
Cow position: chr1:23086535-23086293 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 182
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 114, 22

Conread position: 212-465
Cow position: chr1:61554223-61553977 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 192
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 35, 23

Conread position: 212-465
Cow position: chr1:92708992-92709240 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 81, 21

Conread position: 215-465
Cow position: chr1:57357249-57357498 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 80, 18

Conread position: 216-375
Cow position: chr1:81454417-81454579 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 78, 17

Conread position: 216-459
Cow position: chr1:31126985-31126749 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 79, 19

Conread position: 216-511
Cow position: chr1:89915730-89916017 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 78, 17

Conread position: 221-446
Cow position: chr1:6968606-6968826 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 168
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 71, 6

Conread position: 221-458
Cow position: chr1:64753276-64753509 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 12

Conread position: 222-463
Cow position: chr1:4279759-4279527 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 12

Conread position: 222-465
Cow position: chr1:31979086-31978851 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 11

Conread position: 222-465
Cow position: chr1:81491327-81491560 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 117, 11

Conread position: 232-362
Cow position: chr1:24763977-24763844 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 232-396
Cow position: chr1:17092282-17092447 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 0

Conread position: 233-349
Cow position: chr1:70178165-70178284 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 233-362
Cow position: chr1:6309433-6309301 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 233-362
Cow position: chr1:7489302-7489170 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 233-362
Cow position: chr1:46389186-46389318 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 233-390
Cow position: chr1:57562840-57562999 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 46, 24

Conread position: 233-391
Cow position: chr1:13992446-13992605 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 106, 74

Conread position: 233-394
Cow position: chr1:20264681-20264516 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 90

Conread position: 233-394
Cow position: chr1:35544490-35544332 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 131

Conread position: 233-461
Cow position: chr1:100397446-100397658 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 51

Conread position: 233-462
Cow position: chr1:55114559-55114781 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 233-463
Cow position: chr1:71086904-71087122 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 133

Conread position: 233-464
Cow position: chr1:60860124-60860350 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 67, 17

Conread position: 233-465
Cow position: chr1:65187651-65187878 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 18, 76

Conread position: 233-465
Cow position: chr1:85000881-85000656 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 50, 76

Conread position: 233-465
Cow position: chr1:93244692-93244917 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 173
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 76

Conread position: 234-361
Cow position: chr1:15983851-15983726 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 78

Conread position: 234-394
Cow position: chr1:84760702-84760535 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 235-459
Cow position: chr1:57854373-57854593 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 11

Conread position: 237-459
Cow position: chr1:90845529-90845314 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 76

Conread position: 237-465
Cow position: chr1:57893317-57893555 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 143

Conread position: 237-469
Cow position: chr1:20807118-20806895 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 44, 71

Conread position: 237-469
Cow position: chr1:83321643-83321412 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 160

Conread position: 242-469
Cow position: chr1:69702969-69703194 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 159

Conread position: 248-390
Cow position: chr1:13738112-13737967 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 257-464
Cow position: chr1:80275840-80275640 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 56

Conread position: 580-795
Cow position: chr1:97175680-97175475 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 98

Conread position: 600-764
Cow position: chr1:39060342-39060179 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 134
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 43, 0

Conread position: 600-849
Cow position: chr1:29838134-29837886 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 70

Conread position: 600-859
Cow position: chr1:33420043-33420281 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 189
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 131, 0

Conread position: 677-870
Cow position: chr1:29835729-29835545 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 55

Show alignments to all cow chromosomes.