Cow genome map
Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
Conread position: | 212-354 |
Cow position: | chr1:4264770-4264623 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 113 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 84, 21 |
Conread position: | 212-363 |
Cow position: | chr1:94761492-94761341 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 83, 21 |
Conread position: | 212-391 |
Cow position: | chr1:93391855-93392033 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 136 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 123, 22 |
Conread position: | 212-393 |
Cow position: | chr1:13313928-13314114 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 80, 21 |
Conread position: | 212-463 |
Cow position: | chr1:67902293-67902056 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 179 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 84, 21 |
Conread position: | 212-465 |
Cow position: | chr1:23086535-23086293 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 182 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 114, 22 |
Conread position: | 212-465 |
Cow position: | chr1:61554223-61553977 (view UCSC Genome Browser custom track) |
Alignm length: | 256 |
Alignm identity: | 192 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 35, 23 |
Conread position: | 212-465 |
Cow position: | chr1:92708992-92709240 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 184 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 81, 21 |
Conread position: | 215-465 |
Cow position: | chr1:57357249-57357498 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 174 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 80, 18 |
Conread position: | 216-375 |
Cow position: | chr1:81454417-81454579 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 131 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 78, 17 |
Conread position: | 216-459 |
Cow position: | chr1:31126985-31126749 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 189 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 79, 19 |
Conread position: | 216-511 |
Cow position: | chr1:89915730-89916017 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 216 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 78, 17 |
Conread position: | 221-446 |
Cow position: | chr1:6968606-6968826 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 168 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 71, 6 |
Conread position: | 221-458 |
Cow position: | chr1:64753276-64753509 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 182 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 63, 12 |
Conread position: | 222-463 |
Cow position: | chr1:4279759-4279527 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 173 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 72, 12 |
Conread position: | 222-465 |
Cow position: | chr1:31979086-31978851 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 116, 11 |
Conread position: | 222-465 |
Cow position: | chr1:81491327-81491560 (view UCSC Genome Browser custom track) |
Alignm length: | 245 |
Alignm identity: | 175 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 117, 11 |
Conread position: | 232-362 |
Cow position: | chr1:24763977-24763844 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 232-396 |
Cow position: | chr1:17092282-17092447 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 119 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 233-349 |
Cow position: | chr1:70178165-70178284 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 233-362 |
Cow position: | chr1:6309433-6309301 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 233-362 |
Cow position: | chr1:7489302-7489170 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 106 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 233-362 |
Cow position: | chr1:46389186-46389318 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 102 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 233-390 |
Cow position: | chr1:57562840-57562999 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 126 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 46, 24 |
Conread position: | 233-391 |
Cow position: | chr1:13992446-13992605 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 123 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 106, 74 |
Conread position: | 233-394 |
Cow position: | chr1:20264681-20264516 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 125 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 61, 90 |
Conread position: | 233-394 |
Cow position: | chr1:35544490-35544332 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 123 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 62, 131 |
Conread position: | 233-461 |
Cow position: | chr1:100397446-100397658 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 161 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 65, 51 |
Conread position: | 233-462 |
Cow position: | chr1:55114559-55114781 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 166 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 233-463 |
Cow position: | chr1:71086904-71087122 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 171 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 62, 133 |
Conread position: | 233-464 |
Cow position: | chr1:60860124-60860350 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 180 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 67, 17 |
Conread position: | 233-465 |
Cow position: | chr1:65187651-65187878 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 167 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 18, 76 |
Conread position: | 233-465 |
Cow position: | chr1:85000881-85000656 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 172 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 50, 76 |
Conread position: | 233-465 |
Cow position: | chr1:93244692-93244917 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 173 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 48, 76 |
Conread position: | 234-361 |
Cow position: | chr1:15983851-15983726 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 104 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 61, 78 |
Conread position: | 234-394 |
Cow position: | chr1:84760702-84760535 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 133 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 235-459 |
Cow position: | chr1:57854373-57854593 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 169 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 63, 11 |
Conread position: | 237-459 |
Cow position: | chr1:90845529-90845314 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 58, 76 |
Conread position: | 237-465 |
Cow position: | chr1:57893317-57893555 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 170 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 57, 143 |
Conread position: | 237-469 |
Cow position: | chr1:20807118-20806895 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 44, 71 |
Conread position: | 237-469 |
Cow position: | chr1:83321643-83321412 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 165 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 43, 160 |
Conread position: | 242-469 |
Cow position: | chr1:69702969-69703194 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 164 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 37, 159 |
Conread position: | 248-390 |
Cow position: | chr1:13738112-13737967 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 257-464 |
Cow position: | chr1:80275840-80275640 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 154 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 38, 56 |
Conread position: | 580-795 |
Cow position: | chr1:97175680-97175475 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 166 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 8, 98 |
Conread position: | 600-764 |
Cow position: | chr1:39060342-39060179 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 134 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 600-849 |
Cow position: | chr1:29838134-29837886 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 197, 70 |
Conread position: | 600-859 |
Cow position: | chr1:33420043-33420281 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 189 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 677-870 |
Cow position: | chr1:29835729-29835545 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 144 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 121, 55 |
Show alignments to all cow chromosomes.