Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 210-390 |
| Cow position: | chr10:69685772-69685587 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 85, 23 |
| Conread position: | 212-394 |
| Cow position: | chr10:40428533-40428711 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-446 |
| Cow position: | chr10:17179300-17179062 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 212-465 |
| Cow position: | chr10:26023521-26023765 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 212-465 |
| Cow position: | chr10:58840555-58840804 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 80, 19 |
| Conread position: | 221-459 |
| Cow position: | chr10:3648700-3648470 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 222-465 |
| Cow position: | chr10:38435335-38435567 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 223-464 |
| Cow position: | chr10:5864036-5863801 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 77, 11 |
| Conread position: | 226-471 |
| Cow position: | chr10:52420879-52421115 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 55, 29 |
| Conread position: | 232-463 |
| Cow position: | chr10:32981105-32981321 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 63, 78 |
| Conread position: | 232-463 |
| Cow position: | chr10:52666792-52666574 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 232-463 |
| Cow position: | chr10:63475439-63475225 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 63, 80 |
| Conread position: | 233-361 |
| Cow position: | chr10:23734098-23734229 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-361 |
| Cow position: | chr10:36474677-36474806 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 62, 104 |
| Conread position: | 233-362 |
| Cow position: | chr10:55305450-55305582 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-390 |
| Cow position: | chr10:10223501-10223658 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 59, 104 |
| Conread position: | 233-446 |
| Cow position: | chr10:15381474-15381683 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 48, 166 |
| Conread position: | 233-459 |
| Cow position: | chr10:4909083-4909302 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 122 |
| Conread position: | 233-463 |
| Cow position: | chr10:16951182-16951402 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 233-463 |
| Cow position: | chr10:29495757-29495537 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 105, 66 |
| Conread position: | 233-465 |
| Cow position: | chr10:726530-726757 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 51, 166 |
| Conread position: | 233-465 |
| Cow position: | chr10:12537774-12537551 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 62, 77 |
| Conread position: | 233-465 |
| Cow position: | chr10:50527680-50527434 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 234-366 |
| Cow position: | chr10:55932509-55932643 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 237-397 |
| Cow position: | chr10:8095095-8095256 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 14, 76 |
| Conread position: | 237-451 |
| Cow position: | chr10:14959717-14959927 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 137 |
| Conread position: | 237-465 |
| Cow position: | chr10:16804336-16804113 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 237-482 |
| Cow position: | chr10:19651562-19651325 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 41, 71 |
| Conread position: | 244-470 |
| Cow position: | chr10:42673542-42673319 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 37, 158 |
| Conread position: | 248-465 |
| Cow position: | chr10:63378527-63378315 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 43, 151 |
| Conread position: | 253-463 |
| Cow position: | chr10:63029954-63029748 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 146 |
| Conread position: | 275-471 |
| Cow position: | chr10:1862066-1861876 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 600-931 |
| Cow position: | chr10:24916433-24916765 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 46 |
Show alignments to all cow chromosomes.