Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 191-468 |
| Cow position: | chr12:31871133-31870857 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 8, 196 |
| Conread position: | 212-361 |
| Cow position: | chr12:30446508-30446356 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-459 |
| Cow position: | chr12:15072932-15072699 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 21 |
| Conread position: | 212-461 |
| Cow position: | chr12:13634673-13634907 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 212-464 |
| Cow position: | chr12:34597940-34597700 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 212-465 |
| Cow position: | chr12:26292725-26292478 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 215-461 |
| Cow position: | chr12:39177707-39177476 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 216-447 |
| Cow position: | chr12:15131721-15131948 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 216-459 |
| Cow position: | chr12:36069314-36069078 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 220-470 |
| Cow position: | chr12:40548965-40549209 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 230-465 |
| Cow position: | chr12:16352503-16352267 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 146 |
| Conread position: | 232-362 |
| Cow position: | chr12:8963589-8963722 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 41, 47 |
| Conread position: | 233-358 |
| Cow position: | chr12:9276920-9277048 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-360 |
| Cow position: | chr12:30231886-30231755 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 233-362 |
| Cow position: | chr12:9014111-9013979 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-372 |
| Cow position: | chr12:27133427-27133568 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 63, 134 |
| Conread position: | 233-394 |
| Cow position: | chr12:31608823-31608658 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 233-452 |
| Cow position: | chr12:30531744-30531956 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 106, 72 |
| Conread position: | 233-463 |
| Cow position: | chr12:5982364-5982144 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 71 |
| Conread position: | 233-463 |
| Cow position: | chr12:6931802-6931574 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 48 |
| Conread position: | 233-463 |
| Cow position: | chr12:41777832-41778053 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 67, 48 |
| Conread position: | 233-464 |
| Cow position: | chr12:16081850-16081624 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 165 |
| Conread position: | 233-464 |
| Cow position: | chr12:21268465-21268690 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 102, 73 |
| Conread position: | 233-465 |
| Cow position: | chr12:4146289-4146065 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 233-465 |
| Cow position: | chr12:15365716-15365481 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 163 |
| Conread position: | 233-471 |
| Cow position: | chr12:39551777-39552011 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 51, 164 |
| Conread position: | 233-471 |
| Cow position: | chr12:45703978-45703747 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 47, 75 |
| Conread position: | 237-411 |
| Cow position: | chr12:2005125-2005294 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 237-459 |
| Cow position: | chr12:35638734-35638944 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 71 |
| Conread position: | 237-464 |
| Cow position: | chr12:20225528-20225742 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 237-465 |
| Cow position: | chr12:11213127-11213349 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 43, 160 |
| Conread position: | 237-465 |
| Cow position: | chr12:42786249-42786030 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 241-463 |
| Cow position: | chr12:42941061-42940845 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 93, 63 |
| Conread position: | 241-464 |
| Cow position: | chr12:39115171-39114965 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 98, 63 |
| Conread position: | 256-464 |
| Cow position: | chr12:26174407-26174605 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 720-931 |
| Cow position: | chr12:29247170-29246959 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 9 |
Show alignments to all cow chromosomes.