Cow genome map

Conread name: Ss1.1-Ova1-OVRM1H090179.5

Conread position: 212-459
Cow position: chr15:44997835-44998078 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 82, 22

Conread position: 212-460
Cow position: chr15:34170584-34170350 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 21

Conread position: 212-461
Cow position: chr15:8439509-8439753 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 79, 21

Conread position: 212-465
Cow position: chr15:16431978-16431731 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 21

Conread position: 212-465
Cow position: chr15:51241153-51241397 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 195
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 68, 21

Conread position: 217-463
Cow position: chr15:42551657-42551412 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 41

Conread position: 217-465
Cow position: chr15:32432367-32432607 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 17, 25

Conread position: 218-464
Cow position: chr15:6447228-6447472 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 183
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 74, 15

Conread position: 222-463
Cow position: chr15:45509599-45509834 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 11

Conread position: 222-471
Cow position: chr15:20128656-20128900 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 62, 11

Conread position: 231-380
Cow position: chr15:25466313-25466159 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 232-363
Cow position: chr15:18280224-18280090 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 106

Conread position: 232-463
Cow position: chr15:24399766-24399545 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 134

Conread position: 233-361
Cow position: chr15:8439030-8439161 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 233-361
Cow position: chr15:19934820-19934689 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 233-362
Cow position: chr15:13994714-13994582 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 233-366
Cow position: chr15:49130202-49130339 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 233-372
Cow position: chr15:32659986-32660127 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 105

Conread position: 233-382
Cow position: chr15:45696375-45696530 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 233-390
Cow position: chr15:14418293-14418138 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 74

Conread position: 233-390
Cow position: chr15:14470803-14470963 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 233-390
Cow position: chr15:22516619-22516463 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 61, 109

Conread position: 233-390
Cow position: chr15:35449507-35449668 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 132
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 0

Conread position: 233-462
Cow position: chr15:12799366-12799581 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 73

Conread position: 233-464
Cow position: chr15:50442171-50441944 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 167
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 154

Conread position: 233-465
Cow position: chr15:19728793-19729017 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 102, 75

Conread position: 233-465
Cow position: chr15:22548284-22548063 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 97, 73

Conread position: 233-465
Cow position: chr15:42659973-42659744 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 183
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 61, 77

Conread position: 234-465
Cow position: chr15:15632668-15632885 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 168
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 79

Conread position: 234-465
Cow position: chr15:17189768-17189993 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 161
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 235-458
Cow position: chr15:1304511-1304295 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 100, 69

Conread position: 237-465
Cow position: chr15:33611697-33611929 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 165

Conread position: 238-464
Cow position: chr15:18675638-18675859 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 149

Conread position: 240-396
Cow position: chr15:50547810-50547647 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 244-465
Cow position: chr15:6309488-6309268 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 37, 158

Conread position: 257-466
Cow position: chr15:33464634-33464841 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 38, 141

Conread position: 567-864
Cow position: chr15:53280703-53280423 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 21, 43

Conread position: 600-835
Cow position: chr15:37720648-37720889 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 94, 0

Conread position: 600-845
Cow position: chr15:6506495-6506736 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 187
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 62, 70

Show alignments to all cow chromosomes.