Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 191-461 |
| Cow position: | chr17:10549073-10549321 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 212-391 |
| Cow position: | chr17:25650647-25650828 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 212-394 |
| Cow position: | chr17:35129737-35129918 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 116, 21 |
| Conread position: | 212-463 |
| Cow position: | chr17:23463615-23463866 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 212-463 |
| Cow position: | chr17:34040855-34041101 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 212-465 |
| Cow position: | chr17:21342830-21342585 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 215-465 |
| Cow position: | chr17:22460690-22460443 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 18 |
| Conread position: | 216-381 |
| Cow position: | chr17:18597011-18597173 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 119, 17 |
| Conread position: | 221-394 |
| Cow position: | chr17:34377703-34377528 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 222-463 |
| Cow position: | chr17:5821073-5821310 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 233-353 |
| Cow position: | chr17:23468214-23468333 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 233-358 |
| Cow position: | chr17:45798692-45798564 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-377 |
| Cow position: | chr17:38043692-38043840 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 233-394 |
| Cow position: | chr17:10851558-10851393 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 233-447 |
| Cow position: | chr17:36204948-36205159 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 233-464 |
| Cow position: | chr17:15919542-15919322 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 233-464 |
| Cow position: | chr17:42793909-42794129 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 76 |
| Conread position: | 233-465 |
| Cow position: | chr17:6003038-6003267 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 233-465 |
| Cow position: | chr17:24566420-24566198 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 233-465 |
| Cow position: | chr17:25103727-25103501 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 45, 75 |
| Conread position: | 234-394 |
| Cow position: | chr17:24860668-24860503 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 234-464 |
| Cow position: | chr17:24862462-24862234 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 167 |
| Conread position: | 237-396 |
| Cow position: | chr17:21920840-21921000 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 241-393 |
| Cow position: | chr17:23907111-23907265 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 567-846 |
| Cow position: | chr17:22542149-22541867 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 587-908 |
| Cow position: | chr17:41782178-41781856 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 77 |
| Conread position: | 657-849 |
| Cow position: | chr17:37353501-37353308 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 144, 183 |
| Conread position: | 720-925 |
| Cow position: | chr17:30886560-30886771 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 26, 113 |
Show alignments to all cow chromosomes.