Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 212-362 |
| Cow position: | chr20:3531984-3531832 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 212-396 |
| Cow position: | chr20:1511794-1511613 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 212-464 |
| Cow position: | chr20:35434561-35434794 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 212-465 |
| Cow position: | chr20:13124831-13124577 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-471 |
| Cow position: | chr20:41157331-41157584 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 221-394 |
| Cow position: | chr20:25039113-25038940 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 221-405 |
| Cow position: | chr20:35181543-35181725 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 118, 12 |
| Conread position: | 221-464 |
| Cow position: | chr20:37910897-37911130 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 222-345 |
| Cow position: | chr20:31431142-31431264 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 222-381 |
| Cow position: | chr20:13080100-13079937 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 222-465 |
| Cow position: | chr20:13282307-13282067 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 231-447 |
| Cow position: | chr20:10508358-10508143 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 48, 164 |
| Conread position: | 232-393 |
| Cow position: | chr20:13083302-13083471 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 233-360 |
| Cow position: | chr20:28137726-28137596 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-436 |
| Cow position: | chr20:33773219-33773008 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 115 |
| Conread position: | 233-457 |
| Cow position: | chr20:8298031-8297812 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 105 |
| Conread position: | 233-461 |
| Cow position: | chr20:19030734-19030511 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 71 |
| Conread position: | 233-463 |
| Cow position: | chr20:22412764-22412978 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 234-459 |
| Cow position: | chr20:24340318-24340098 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 61, 155 |
| Conread position: | 235-459 |
| Cow position: | chr20:33098191-33098412 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 55, 155 |
| Conread position: | 237-465 |
| Cow position: | chr20:37059177-37059403 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 44, 150 |
| Conread position: | 244-460 |
| Cow position: | chr20:14592033-14592249 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 159 |
| Conread position: | 245-394 |
| Cow position: | chr20:19490654-19490507 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 253-464 |
| Cow position: | chr20:23921543-23921750 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 43, 140 |
| Conread position: | 266-459 |
| Cow position: | chr20:649362-649173 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 29, 121 |
| Conread position: | 266-464 |
| Cow position: | chr20:22682108-22681917 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 86 |
| Conread position: | 277-464 |
| Cow position: | chr20:38032124-38031942 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 18, 107 |
| Conread position: | 601-931 |
| Cow position: | chr20:8876884-8876565 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 41 |
| Conread position: | 631-931 |
| Cow position: | chr20:5174396-5174684 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 80, 0 |
Show alignments to all cow chromosomes.