Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 212-457 |
| Cow position: | chr21:21407643-21407883 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 82, 174 |
| Conread position: | 212-465 |
| Cow position: | chr21:42179854-42179605 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 216-459 |
| Cow position: | chr21:28768417-28768174 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 78, 17 |
| Conread position: | 221-394 |
| Cow position: | chr21:41070623-41070451 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 222-391 |
| Cow position: | chr21:7402642-7402814 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 222-464 |
| Cow position: | chr21:18171755-18171988 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 116, 11 |
| Conread position: | 224-441 |
| Cow position: | chr21:36212088-36212290 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 114, 9 |
| Conread position: | 231-465 |
| Cow position: | chr21:18571798-18572029 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 232-464 |
| Cow position: | chr21:10556337-10556566 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 233-360 |
| Cow position: | chr21:41413263-41413393 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-361 |
| Cow position: | chr21:14787341-14787468 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 73 |
| Conread position: | 233-362 |
| Cow position: | chr21:36667065-36667197 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-392 |
| Cow position: | chr21:6729335-6729179 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 233-447 |
| Cow position: | chr21:8375559-8375762 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 135 |
| Conread position: | 233-461 |
| Cow position: | chr21:3475450-3475231 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 51, 117 |
| Conread position: | 233-463 |
| Cow position: | chr21:20016014-20016241 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 62, 175 |
| Conread position: | 233-463 |
| Cow position: | chr21:42853589-42853811 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 135 |
| Conread position: | 233-465 |
| Cow position: | chr21:19092503-19092719 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 233-471 |
| Cow position: | chr21:47962708-47962476 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 51, 118 |
| Conread position: | 235-361 |
| Cow position: | chr21:42227864-42227993 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 83 |
| Conread position: | 235-394 |
| Cow position: | chr21:35322840-35322676 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 235-428 |
| Cow position: | chr21:40644715-40644902 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 61, 129 |
| Conread position: | 237-463 |
| Cow position: | chr21:19866794-19867007 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 9 |
| Conread position: | 244-470 |
| Cow position: | chr21:41566112-41565888 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 82 |
| Conread position: | 600-915 |
| Cow position: | chr21:39727416-39727109 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 224 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 59, 93 |
Show alignments to all cow chromosomes.