Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 211-394 |
| Cow position: | chr22:13928955-13928767 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 21 |
| Conread position: | 212-360 |
| Cow position: | chr22:8040705-8040855 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 212-362 |
| Cow position: | chr22:8033463-8033615 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 212-372 |
| Cow position: | chr22:8133539-8133701 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 79, 21 |
| Conread position: | 212-463 |
| Cow position: | chr22:17926473-17926717 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-465 |
| Cow position: | chr22:6438076-6437831 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 212-466 |
| Cow position: | chr22:19971094-19971344 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 215-465 |
| Cow position: | chr22:27748140-27747893 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 216-465 |
| Cow position: | chr22:19093318-19093078 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 119, 17 |
| Conread position: | 221-463 |
| Cow position: | chr22:35530896-35531131 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 223-459 |
| Cow position: | chr22:2002335-2002101 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 76, 10 |
| Conread position: | 224-446 |
| Cow position: | chr22:39459029-39459248 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 164 |
| Conread position: | 224-469 |
| Cow position: | chr22:674651-674415 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 230-463 |
| Cow position: | chr22:42035533-42035767 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 66, 16 |
| Conread position: | 232-380 |
| Cow position: | chr22:10627608-10627456 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 232-396 |
| Cow position: | chr22:13956340-13956503 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 136 |
| Conread position: | 233-360 |
| Cow position: | chr22:41685209-41685339 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-362 |
| Cow position: | chr22:31381290-31381423 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-394 |
| Cow position: | chr22:17310524-17310689 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 233-446 |
| Cow position: | chr22:18993936-18993729 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 72 |
| Conread position: | 233-463 |
| Cow position: | chr22:302847-303068 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 233-463 |
| Cow position: | chr22:4997837-4998062 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 75, 165 |
| Conread position: | 233-463 |
| Cow position: | chr22:8121333-8121551 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 167 |
| Conread position: | 233-464 |
| Cow position: | chr22:311460-311706 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 47, 107 |
| Conread position: | 233-468 |
| Cow position: | chr22:2527235-2527462 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 102, 73 |
| Conread position: | 235-362 |
| Cow position: | chr22:27076927-27076797 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 235-465 |
| Cow position: | chr22:6702810-6702582 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 239-391 |
| Cow position: | chr22:12752628-12752785 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 241-390 |
| Cow position: | chr22:18698493-18698646 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 244-470 |
| Cow position: | chr22:2377054-2376830 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 37, 158 |
| Conread position: | 244-470 |
| Cow position: | chr22:3420958-3421182 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 32, 158 |
| Conread position: | 247-405 |
| Cow position: | chr22:39503459-39503295 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 257-459 |
| Cow position: | chr22:17874211-17874014 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 129 |
| Conread position: | 600-852 |
| Cow position: | chr22:20970749-20971003 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 17 |
| Conread position: | 600-931 |
| Cow position: | chr22:13521234-13521549 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 731-931 |
| Cow position: | chr22:34225554-34225349 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 102 |
Show alignments to all cow chromosomes.