Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 189-464 |
| Cow position: | chr24:31203768-31204038 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 104, 44 |
| Conread position: | 212-362 |
| Cow position: | chr24:23686640-23686488 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 212-463 |
| Cow position: | chr24:6089157-6088914 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-463 |
| Cow position: | chr24:36906136-36906377 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 212-465 |
| Cow position: | chr24:17844950-17845199 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 216-459 |
| Cow position: | chr24:26680315-26680543 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 216-459 |
| Cow position: | chr24:27333111-27332882 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 123, 17 |
| Conread position: | 217-464 |
| Cow position: | chr24:319174-318924 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 165, 16 |
| Conread position: | 221-463 |
| Cow position: | chr24:6073550-6073315 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 232-464 |
| Cow position: | chr24:29356015-29356245 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 52, 169 |
| Conread position: | 233-361 |
| Cow position: | chr24:17972994-17973126 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-459 |
| Cow position: | chr24:27254250-27254030 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 233-463 |
| Cow position: | chr24:9096132-9096349 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 116 |
| Conread position: | 233-471 |
| Cow position: | chr24:5917363-5917597 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 51, 163 |
| Conread position: | 237-457 |
| Cow position: | chr24:36836420-36836206 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 49, 161 |
| Conread position: | 240-465 |
| Cow position: | chr24:2448313-2448092 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 241-362 |
| Cow position: | chr24:20260349-20260225 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 245-464 |
| Cow position: | chr24:35553070-35553277 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 85, 59 |
| Conread position: | 248-469 |
| Cow position: | chr24:9166998-9167204 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 84, 8 |
| Conread position: | 274-459 |
| Cow position: | chr24:26874448-26874629 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 5, 112 |
Show alignments to all cow chromosomes.