Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 210-465 |
| Cow position: | chr27:29498718-29498965 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 27 |
| Conread position: | 212-455 |
| Cow position: | chr27:22123951-22123713 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 30 |
| Conread position: | 212-469 |
| Cow position: | chr27:29996030-29996279 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 123, 21 |
| Conread position: | 216-381 |
| Cow position: | chr27:18109744-18109577 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 78, 15 |
| Conread position: | 221-464 |
| Cow position: | chr27:22567815-22567581 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 222-448 |
| Cow position: | chr27:23190452-23190673 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 222-463 |
| Cow position: | chr27:7086265-7086496 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 223, 11 |
| Conread position: | 224-465 |
| Cow position: | chr27:14139231-14138994 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 232-362 |
| Cow position: | chr27:29489497-29489364 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 232-465 |
| Cow position: | chr27:3912066-3912294 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 63, 43 |
| Conread position: | 232-465 |
| Cow position: | chr27:14181718-14181498 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 233-361 |
| Cow position: | chr27:21601177-21601308 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-362 |
| Cow position: | chr27:2392461-2392593 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-393 |
| Cow position: | chr27:14681131-14680968 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-444 |
| Cow position: | chr27:26502021-26501803 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 233-463 |
| Cow position: | chr27:26813155-26812935 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 233-464 |
| Cow position: | chr27:14333728-14333505 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 102, 133 |
| Conread position: | 234-362 |
| Cow position: | chr27:58095-58226 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 234-362 |
| Cow position: | chr27:18467509-18467378 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 234-465 |
| Cow position: | chr27:20754411-20754191 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 235-463 |
| Cow position: | chr27:23052615-23052838 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 59, 161 |
| Conread position: | 237-443 |
| Cow position: | chr27:530682-530880 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 76 |
| Conread position: | 237-463 |
| Cow position: | chr27:23877558-23877774 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 237-463 |
| Cow position: | chr27:30988270-30988054 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 129 |
| Conread position: | 237-465 |
| Cow position: | chr27:14151992-14152215 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 98, 67 |
| Conread position: | 241-464 |
| Cow position: | chr27:3082964-3082745 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 43, 153 |
| Conread position: | 263-463 |
| Cow position: | chr27:7634447-7634642 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 124 |
Show alignments to all cow chromosomes.