Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 212-471 |
| Cow position: | chr28:19106005-19105751 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 215-447 |
| Cow position: | chr28:2370701-2370478 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 232-486 |
| Cow position: | chr28:32649145-32649399 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 169 |
| Conread position: | 233-362 |
| Cow position: | chr28:74399-74531 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-362 |
| Cow position: | chr28:91623-91755 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-362 |
| Cow position: | chr28:513696-513828 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-362 |
| Cow position: | chr28:13771538-13771406 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-396 |
| Cow position: | chr28:34736375-34736203 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 233-462 |
| Cow position: | chr28:4547532-4547762 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 63, 154 |
| Conread position: | 233-463 |
| Cow position: | chr28:80516-80733 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 63, 133 |
| Conread position: | 233-463 |
| Cow position: | chr28:7239082-7238855 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 61, 175 |
| Conread position: | 233-465 |
| Cow position: | chr28:22969068-22969300 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 47, 171 |
| Conread position: | 236-463 |
| Cow position: | chr28:28730884-28730669 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 237-388 |
| Cow position: | chr28:23344438-23344594 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 237-393 |
| Cow position: | chr28:9417514-9417674 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 241-389 |
| Cow position: | chr28:17529251-17529102 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 38, 80 |
| Conread position: | 248-470 |
| Cow position: | chr28:5341018-5341239 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 36, 155 |
| Conread position: | 257-463 |
| Cow position: | chr28:4130158-4129957 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 264-463 |
| Cow position: | chr28:29984731-29984927 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 136 |
| Conread position: | 559-884 |
| Cow position: | chr28:32282906-32282578 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 134 |
| Conread position: | 568-859 |
| Cow position: | chr28:32369772-32370062 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 17 |
| Conread position: | 604-781 |
| Cow position: | chr28:34396680-34396855 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 48 |
Show alignments to all cow chromosomes.