Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 210-394 |
| Cow position: | chr29:30723429-30723612 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 25 |
| Conread position: | 212-463 |
| Cow position: | chr29:8940859-8940614 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-463 |
| Cow position: | chr29:26596821-26597066 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 82, 22 |
| Conread position: | 212-463 |
| Cow position: | chr29:28847244-28846999 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 212-465 |
| Cow position: | chr29:43994199-43994442 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 216-463 |
| Cow position: | chr29:36638708-36638944 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 17 |
| Conread position: | 221-457 |
| Cow position: | chr29:33435076-33435311 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 222-393 |
| Cow position: | chr29:31236351-31236527 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 70, 11 |
| Conread position: | 222-459 |
| Cow position: | chr29:15852452-15852675 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 222-463 |
| Cow position: | chr29:6389781-6390016 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 227-394 |
| Cow position: | chr29:30714991-30714826 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 231-447 |
| Cow position: | chr29:5624533-5624750 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 166 |
| Conread position: | 233-362 |
| Cow position: | chr29:420720-420852 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-362 |
| Cow position: | chr29:32882268-32882136 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 233-463 |
| Cow position: | chr29:28794698-28794925 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 61, 166 |
| Conread position: | 233-463 |
| Cow position: | chr29:42198781-42198556 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 233-465 |
| Cow position: | chr29:12897257-12897031 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 61, 28 |
| Conread position: | 234-394 |
| Cow position: | chr29:31218562-31218719 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 47, 76 |
| Conread position: | 235-461 |
| Cow position: | chr29:11449926-11449702 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 23, 159 |
| Conread position: | 235-463 |
| Cow position: | chr29:30691209-30690988 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 237-394 |
| Cow position: | chr29:5523259-5523417 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 237-394 |
| Cow position: | chr29:18183094-18182935 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 241-394 |
| Cow position: | chr29:44130782-44130938 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 266-471 |
| Cow position: | chr29:32844719-32844521 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 273-465 |
| Cow position: | chr29:20706489-20706674 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 600-932 |
| Cow position: | chr29:12772922-12772612 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 64 |
Show alignments to all cow chromosomes.