Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 191-461 |
| Cow position: | chr6:47226186-47225918 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 206 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 8, 45 |
| Conread position: | 212-362 |
| Cow position: | chr6:61542590-61542742 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 20 |
| Conread position: | 212-461 |
| Cow position: | chr6:49801486-49801241 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 212-462 |
| Cow position: | chr6:14883324-14883559 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 212-463 |
| Cow position: | chr6:37884777-37884529 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 212-463 |
| Cow position: | chr6:50743228-50742988 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-463 |
| Cow position: | chr6:53233634-53233874 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 222-465 |
| Cow position: | chr6:60794883-60795121 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 73, 11 |
| Conread position: | 230-459 |
| Cow position: | chr6:42804220-42803997 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 64, 18 |
| Conread position: | 232-361 |
| Cow position: | chr6:15068748-15068879 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 57, 122 |
| Conread position: | 232-362 |
| Cow position: | chr6:37390233-37390367 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 60, 124 |
| Conread position: | 232-390 |
| Cow position: | chr6:50265891-50266052 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 72 |
| Conread position: | 232-459 |
| Cow position: | chr6:38939795-38939574 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 232-461 |
| Cow position: | chr6:7496898-7497113 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 232-465 |
| Cow position: | chr6:26451214-26451443 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 105, 72 |
| Conread position: | 233-361 |
| Cow position: | chr6:1632426-1632296 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 233-361 |
| Cow position: | chr6:26454224-26454355 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 233-391 |
| Cow position: | chr6:23899863-23900025 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 53, 22 |
| Conread position: | 233-459 |
| Cow position: | chr6:24803702-24803922 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 62, 153 |
| Conread position: | 233-459 |
| Cow position: | chr6:62860113-62860330 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 61, 105 |
| Conread position: | 233-461 |
| Cow position: | chr6:67782277-67782054 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 62, 22 |
| Conread position: | 233-463 |
| Cow position: | chr6:50481839-50481619 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 62, 133 |
| Conread position: | 233-464 |
| Cow position: | chr6:44496131-44496349 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 104, 72 |
| Conread position: | 233-464 |
| Cow position: | chr6:61436173-61436392 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 233-465 |
| Cow position: | chr6:16604598-16604376 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 235-396 |
| Cow position: | chr6:62994115-62993950 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 13 |
| Conread position: | 237-390 |
| Cow position: | chr6:47228773-47228928 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 52 |
| Conread position: | 237-394 |
| Cow position: | chr6:5984271-5984439 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 237-464 |
| Cow position: | chr6:11177269-11177052 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 22 |
| Conread position: | 244-461 |
| Cow position: | chr6:56910012-56909797 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 154 |
| Conread position: | 261-394 |
| Cow position: | chr6:46378646-46378507 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 600-871 |
| Cow position: | chr6:63881012-63881295 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 600-928 |
| Cow position: | chr6:8792544-8792868 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 129 |
| Conread position: | 655-839 |
| Cow position: | chr6:65190162-65189976 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 655-871 |
| Cow position: | chr6:64700450-64700668 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 169 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 720-931 |
| Cow position: | chr6:5108524-5108321 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 55 |
Show alignments to all cow chromosomes.