Cow genome map
| Conread name: | Ss1.1-Ova1-OVRM1H090179.5 |
| Conread position: | 212-362 |
| Cow position: | chr8:8573665-8573817 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 84, 21 |
| Conread position: | 212-396 |
| Cow position: | chr8:25585130-25584956 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 212-459 |
| Cow position: | chr8:23704474-23704717 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 82, 21 |
| Conread position: | 212-459 |
| Cow position: | chr8:47802000-47802240 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 212-463 |
| Cow position: | chr8:58150370-58150615 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 214-362 |
| Cow position: | chr8:21986483-21986334 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 216-394 |
| Cow position: | chr8:12576671-12576849 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 78, 19 |
| Conread position: | 221-463 |
| Cow position: | chr8:1365728-1365491 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 73, 12 |
| Conread position: | 221-464 |
| Cow position: | chr8:36295267-36295028 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 231-361 |
| Cow position: | chr8:18951149-18951015 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 232-363 |
| Cow position: | chr8:53044079-53044213 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 232-463 |
| Cow position: | chr8:48707535-48707753 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 64, 134 |
| Conread position: | 232-463 |
| Cow position: | chr8:61168882-61168654 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 60, 172 |
| Conread position: | 233-361 |
| Cow position: | chr8:39880792-39880665 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 233-362 |
| Cow position: | chr8:8784255-8784386 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 233-394 |
| Cow position: | chr8:36296237-36296395 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 62, 134 |
| Conread position: | 233-455 |
| Cow position: | chr8:29240570-29240787 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 46, 116 |
| Conread position: | 233-463 |
| Cow position: | chr8:3552141-3552364 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 77 |
| Conread position: | 233-463 |
| Cow position: | chr8:5959218-5959433 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 233-463 |
| Cow position: | chr8:19396423-19396213 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 65, 45 |
| Conread position: | 233-464 |
| Cow position: | chr8:45343897-45344129 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 48, 107 |
| Conread position: | 233-465 |
| Cow position: | chr8:9076962-9076739 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 80 |
| Conread position: | 233-465 |
| Cow position: | chr8:12524776-12525002 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 165, 71 |
| Conread position: | 233-465 |
| Cow position: | chr8:45966124-45966358 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 56, 52 |
| Conread position: | 233-471 |
| Cow position: | chr8:26828974-26828753 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 234-457 |
| Cow position: | chr8:37094371-37094592 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 53, 166 |
| Conread position: | 235-362 |
| Cow position: | chr8:21978105-21977975 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 235-394 |
| Cow position: | chr8:1103067-1102906 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 235-464 |
| Cow position: | chr8:40113816-40113593 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 237-459 |
| Cow position: | chr8:33777319-33777536 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 174, 50 |
| Conread position: | 237-465 |
| Cow position: | chr8:26079771-26079549 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 44, 68 |
| Conread position: | 241-394 |
| Cow position: | chr8:7419172-7419016 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 244-470 |
| Cow position: | chr8:52145816-52145592 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 158 |
| Conread position: | 244-471 |
| Cow position: | chr8:24566339-24566110 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 40, 161 |
| Conread position: | 678-820 |
| Cow position: | chr8:50262424-50262568 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 680-932 |
| Cow position: | chr8:50263374-50263121 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 188 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 118, 22 |
Show alignments to all cow chromosomes.