Cow genome map
| Conread name: | Ss1.1-OvaP-UMC-pputal5-003-f09.3 |
| Conread position: | 20-178 |
| Cow position: | chr19:14940040-14940198 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 24-178 |
| Cow position: | chr19:20678259-20678413 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 33-178 |
| Cow position: | chr19:23614085-23614230 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 203-437 |
| Cow position: | chr19:23597228-23597463 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 207, 0 |
| Conread position: | 205-378 |
| Cow position: | chr19:20677816-20677990 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 205-379 |
| Cow position: | chr19:23597398-23597573 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 205-381 |
| Cow position: | chr19:14940693-14940869 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-436 |
| Cow position: | chr19:14940357-14940589 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 210-379 |
| Cow position: | chr19:14940278-14940448 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 210-379 |
| Cow position: | chr19:14960354-14960183 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 210-379 |
| Cow position: | chr19:20678241-20678411 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 97, 90 |
| Conread position: | 210-409 |
| Cow position: | chr19:20677653-20677852 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 97, 91 |
| Conread position: | 210-416 |
| Cow position: | chr19:23597319-23597526 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 211-380 |
| Cow position: | chr19:23613723-23613892 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 211-421 |
| Cow position: | chr19:14940783-14940994 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 195, 191 |
| Conread position: | 217-382 |
| Cow position: | chr19:23614233-23614398 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-421 |
| Cow position: | chr19:23614151-23614354 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 194, 0 |
| Conread position: | 220-421 |
| Cow position: | chr19:43570176-43569974 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 221-398 |
| Cow position: | chr19:14940877-14941054 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 97 |
| Conread position: | 221-400 |
| Cow position: | chr19:14940625-14940804 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-381 |
| Cow position: | chr19:14940458-14940617 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-407 |
| Cow position: | chr19:14960007-14959822 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 96 |
| Conread position: | 223-380 |
| Cow position: | chr19:23614491-23614648 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-421 |
| Cow position: | chr19:14940207-14940406 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 223-421 |
| Cow position: | chr19:14940543-14940742 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 99, 91 |
| Conread position: | 223-422 |
| Cow position: | chr19:14960424-14960224 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 147, 157 |
| Conread position: | 223-436 |
| Cow position: | chr19:23613399-23613613 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 161, 169 |
| Conread position: | 229-379 |
| Cow position: | chr19:14959512-14959361 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 229-382 |
| Cow position: | chr19:23613993-23614146 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-411 |
| Cow position: | chr19:23650115-23650297 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-411 |
| Cow position: | chr19:43570247-43570069 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 237-382 |
| Cow position: | chr19:23597514-23597659 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 237-421 |
| Cow position: | chr19:23614085-23614270 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 147, 155 |
| Conread position: | 237-421 |
| Cow position: | chr19:23614757-23614942 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 238-379 |
| Cow position: | chr19:14940138-14940280 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 238-421 |
| Cow position: | chr19:14960075-14959891 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 168, 158 |
| Conread position: | 238-421 |
| Cow position: | chr19:23650040-23650224 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 172, 0 |
Show alignments to all cow chromosomes.