Cow genome map
| Conread name: | Ss1.1-OvaP-UMC-pputal5-003-f09.3 |
| Conread position: | 22-207 |
| Cow position: | chr22:12458388-12458203 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 172, 159 |
| Conread position: | 25-178 |
| Cow position: | chr22:12499597-12499750 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-179 |
| Cow position: | chr22:12475662-12475508 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-380 |
| Cow position: | chr22:11640973-11641148 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-383 |
| Cow position: | chr22:12475602-12475424 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 109, 105 |
| Conread position: | 205-421 |
| Cow position: | chr22:12399645-12399428 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 208, 0 |
| Conread position: | 209-411 |
| Cow position: | chr22:12458406-12458203 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 210-377 |
| Cow position: | chr22:12458320-12458153 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-380 |
| Cow position: | chr22:12399304-12399134 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-385 |
| Cow position: | chr22:12398968-12398793 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-421 |
| Cow position: | chr22:12475934-12475721 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 210-421 |
| Cow position: | chr22:12499325-12499538 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 211-437 |
| Cow position: | chr22:12399807-12399580 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 91 |
| Conread position: | 221-381 |
| Cow position: | chr22:12399461-12399300 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 88 |
| Conread position: | 221-401 |
| Cow position: | chr22:12499673-12499853 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-411 |
| Cow position: | chr22:12475754-12475564 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-374 |
| Cow position: | chr22:12499506-12499658 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-407 |
| Cow position: | chr22:12476340-12476156 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-407 |
| Cow position: | chr22:12498919-12499103 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-437 |
| Cow position: | chr22:12399372-12399160 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 229-379 |
| Cow position: | chr22:12475494-12475343 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 229-380 |
| Cow position: | chr22:12385359-12385207 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 229-380 |
| Cow position: | chr22:12399117-12398965 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 110 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 229-392 |
| Cow position: | chr22:12418888-12418725 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-408 |
| Cow position: | chr22:12458049-12457870 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 81, 71 |
| Conread position: | 229-411 |
| Cow position: | chr22:12457965-12457783 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-440 |
| Cow position: | chr22:12399705-12399493 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 184, 0 |
| Conread position: | 236-399 |
| Cow position: | chr22:14429794-14429953 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
Show alignments to all cow chromosomes.