Cow genome map
| Conread name: | Ss1.1-OvaP-UMC-pputal5-003-f09.3 |
| Conread position: | 13-177 |
| Cow position: | chr7:42879066-42878902 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 92 |
| Conread position: | 13-179 |
| Cow position: | chr7:3180160-3180325 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 25-179 |
| Cow position: | chr7:3180339-3180493 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 205-380 |
| Cow position: | chr7:3180231-3180406 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-421 |
| Cow position: | chr7:3180068-3180280 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 203, 0 |
| Conread position: | 221-422 |
| Cow position: | chr7:1014985-1015187 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 189, 0 |
| Conread position: | 222-383 |
| Cow position: | chr7:3180332-3180493 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-411 |
| Cow position: | chr7:3180584-3180773 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-360 |
| Cow position: | chr7:42878892-42878755 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-379 |
| Cow position: | chr7:42879228-42879071 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 223-380 |
| Cow position: | chr7:42878640-42878483 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 223-421 |
| Cow position: | chr7:3180165-3180364 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 187, 0 |
| Conread position: | 224-435 |
| Cow position: | chr7:42878723-42878511 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 146, 160 |
| Conread position: | 229-380 |
| Cow position: | chr7:3180003-3180155 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 229-380 |
| Cow position: | chr7:3180675-3180824 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 229-380 |
| Cow position: | chr7:42879054-42878903 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-408 |
| Cow position: | chr7:3179919-3180098 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 229-421 |
| Cow position: | chr7:3180423-3180616 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 82, 86 |
| Conread position: | 237-379 |
| Cow position: | chr7:3179759-3179902 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 238-382 |
| Cow position: | chr7:8325048-8325192 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 78, 63 |
| Conread position: | 247-379 |
| Cow position: | chr7:11601115-11600982 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 59, 54 |
Show alignments to all cow chromosomes.