Cow genome map


           Conread name:
           Ss1.1-Pey1-58C08.5
        

               Conread position:
               107-315
               

               Cow position:
               chr5:63566646-63566861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               125-305
               

               Cow position:
               chr5:27176142-27175959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               137-316
               

               Cow position:
               chr5:33522085-33521911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               156-316
               

               Cow position:
               chr5:61017062-61017219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               83, 12
               

               Conread position:
               157-314
               

               Cow position:
               chr5:9498901-9499065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               158-315
               

               Cow position:
               chr5:42097115-42096953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               159-315
               

               Cow position:
               chr5:63160295-63160135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               167-302
               

               Cow position:
               chr5:68349477-68349338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               168-323
               

               Cow position:
               chr5:23646778-23646937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               54, 107
               

               Conread position:
               169-302
               

               Cow position:
               chr5:23752984-23753122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               25, 0
               
Show alignments to all cow chromosomes.