Cow genome map
| Conread name: | Ss1.1-Pig1-136N17.5 |
| Conread position: | 14-233 |
| Cow position: | chr1:31642712-31642489 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 165, 6 |
| Conread position: | 14-278 |
| Cow position: | chr1:78922657-78922911 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 6 |
| Conread position: | 15-243 |
| Cow position: | chr1:82912830-82912594 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 20-197 |
| Cow position: | chr1:66685794-66685616 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 159, 123 |
| Conread position: | 22-246 |
| Cow position: | chr1:15026688-15026913 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 157, 35 |
| Conread position: | 35-245 |
| Cow position: | chr1:63605435-63605221 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 59-244 |
| Cow position: | chr1:31811444-31811628 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 62 |
| Conread position: | 59-245 |
| Cow position: | chr1:99913782-99913975 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 63-238 |
| Cow position: | chr1:88375396-88375223 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 109, 63 |
| Conread position: | 64-246 |
| Cow position: | chr1:97226340-97226152 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 68-245 |
| Cow position: | chr1:21999582-21999399 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 68-245 |
| Cow position: | chr1:28873449-28873632 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 68-245 |
| Cow position: | chr1:58336210-58336393 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 68-252 |
| Cow position: | chr1:72186505-72186317 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 68-268 |
| Cow position: | chr1:40574582-40574787 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 111, 192 |
| Conread position: | 71-243 |
| Cow position: | chr1:5355498-5355676 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 71-243 |
| Cow position: | chr1:31397062-31397240 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 71-243 |
| Cow position: | chr1:40053727-40053904 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 71-243 |
| Cow position: | chr1:60339677-60339852 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 93-246 |
| Cow position: | chr1:24651679-24651838 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.