Cow genome map
| Conread name: | Ss1.1-Pig1-136N17.5 |
| Conread position: | 15-243 |
| Cow position: | chr5:27909181-27908945 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 15-266 |
| Cow position: | chr5:54932127-54931870 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 46 |
| Conread position: | 19-241 |
| Cow position: | chr5:32309506-32309279 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 20 |
| Conread position: | 19-241 |
| Cow position: | chr5:47894427-47894212 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 159, 67 |
| Conread position: | 20-245 |
| Cow position: | chr5:68470641-68470414 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 53 |
| Conread position: | 27-246 |
| Cow position: | chr5:4385355-4385578 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 152, 29 |
| Conread position: | 39-246 |
| Cow position: | chr5:41528636-41528423 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 48-246 |
| Cow position: | chr5:12643593-12643389 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 112 |
| Conread position: | 61-240 |
| Cow position: | chr5:35300236-35300423 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 67-245 |
| Cow position: | chr5:37732498-37732681 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 105, 82 |
| Conread position: | 68-245 |
| Cow position: | chr5:6155068-6154885 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 68-245 |
| Cow position: | chr5:73489408-73489225 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 71-240 |
| Cow position: | chr5:44459632-44459807 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 71-243 |
| Cow position: | chr5:4019049-4018872 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 71-243 |
| Cow position: | chr5:18666143-18666321 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 72, 91 |
| Conread position: | 71-243 |
| Cow position: | chr5:23960166-23959988 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 71-243 |
| Cow position: | chr5:26079071-26078893 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 91 |
| Conread position: | 71-243 |
| Cow position: | chr5:31706723-31706901 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 91 |
| Conread position: | 71-243 |
| Cow position: | chr5:48468130-48467952 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
Show alignments to all cow chromosomes.