Cow genome map
| Conread name: | Ss1.1-Pig1-18J02.5 |
| Conread position: | 1-117 |
| Cow position: | chr5:18523002-18522886 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-117 |
| Cow position: | chr5:18735703-18735587 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 111 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-117 |
| Cow position: | chr5:21480471-21480587 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 7-117 |
| Cow position: | chr5:26486215-26486106 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 113-265 |
| Cow position: | chr5:26485465-26485320 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 113-278 |
| Cow position: | chr5:18522247-18522082 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-278 |
| Cow position: | chr5:18734939-18734774 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 113-278 |
| Cow position: | chr5:21481244-21481409 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-364 |
| Cow position: | chr5:18733940-18733852 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 276-364 |
| Cow position: | chr5:21482084-21482172 (view UCSC Genome Browser custom track) |
| Alignm length: | 89 |
| Alignm identity: | 77 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-484 |
| Cow position: | chr5:18520319-18520198 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-484 |
| Cow position: | chr5:18732966-18732845 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-484 |
| Cow position: | chr5:21483073-21483194 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-484 |
| Cow position: | chr5:26483538-26483417 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 363-484 |
| Cow position: | chr5:26496076-26495955 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-632 |
| Cow position: | chr5:18732693-18732543 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 135 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-632 |
| Cow position: | chr5:21483346-21483496 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 132 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-632 |
| Cow position: | chr5:26483265-26483115 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 129 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-632 |
| Cow position: | chr5:26495803-26495653 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 129 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 482-633 |
| Cow position: | chr5:18520049-18519898 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 136 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.