Cow genome map
| Conread name: | Ss1.1-Pig1-21B20.5 |
| Conread position: | 2-357 |
| Cow position: | chr18:22844173-22843815 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 237 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 2-357 |
| Cow position: | chr18:56391235-56390880 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 21 |
| Conread position: | 2-360 |
| Cow position: | chr18:22844341-22843980 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 197, 188 |
| Conread position: | 4-360 |
| Cow position: | chr18:22844084-22843728 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-306 |
| Cow position: | chr18:54668744-54668447 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 12-349 |
| Cow position: | chr18:22843992-22843652 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 227, 221 |
| Conread position: | 12-355 |
| Cow position: | chr18:55497500-55497157 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 12-357 |
| Cow position: | chr18:22843740-22843386 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 13-340 |
| Cow position: | chr18:44817864-44818191 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 30-351 |
| Cow position: | chr18:56391459-56391138 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 31-306 |
| Cow position: | chr18:56391929-56391654 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 71 |
| Conread position: | 31-351 |
| Cow position: | chr18:47846544-47846224 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 36-351 |
| Cow position: | chr18:56391369-56391054 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 36-357 |
| Cow position: | chr18:56391285-56390964 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 40-351 |
| Cow position: | chr18:55497388-55497077 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 57-351 |
| Cow position: | chr18:55497539-55497245 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 224, 205 |
| Conread position: | 60-236 |
| Cow position: | chr18:54670877-54670701 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 66-360 |
| Cow position: | chr18:22844361-22844064 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 135, 129 |
| Conread position: | 67-357 |
| Cow position: | chr18:56391590-56391300 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 132, 119 |
| Conread position: | 70-357 |
| Cow position: | chr18:56391503-56391216 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 197 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 72-357 |
| Cow position: | chr18:56391972-56391687 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 129, 114 |
| Conread position: | 74-360 |
| Cow position: | chr18:54668847-54668561 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 68 |
| Conread position: | 76-308 |
| Cow position: | chr18:55497268-55497036 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 34, 26 |
Show alignments to all cow chromosomes.