Cow genome map
| Conread name: | Ss1.1-Pig1-30E05.5 |
| Conread position: | 1-204 |
| Cow position: | chr29:20030803-20030600 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-208 |
| Cow position: | chr29:19992512-19992305 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-208 |
| Cow position: | chr29:20019713-20019506 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-209 |
| Cow position: | chr29:19979091-19978883 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 1-213 |
| Cow position: | chr29:21346135-21346347 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-215 |
| Cow position: | chr29:21440666-21440452 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-216 |
| Cow position: | chr29:18771680-18771895 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 1-216 |
| Cow position: | chr29:19989243-19989028 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 212, 198 |
| Conread position: | 1-216 |
| Cow position: | chr29:21328516-21328731 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 86 |
| Conread position: | 1-218 |
| Cow position: | chr29:18741101-18740884 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 1-218 |
| Cow position: | chr29:21187766-21187549 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-219 |
| Cow position: | chr29:20003281-20003060 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 210, 0 |
| Conread position: | 1-219 |
| Cow position: | chr29:21176539-21176321 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-225 |
| Cow position: | chr29:21207334-21207110 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-226 |
| Cow position: | chr29:21248686-21248461 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-216 |
| Cow position: | chr29:21202690-21202861 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 45-221 |
| Cow position: | chr29:21297445-21297621 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-420 |
| Cow position: | chr29:21208064-21207863 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-420 |
| Cow position: | chr29:21177262-21177068 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 226-420 |
| Cow position: | chr29:21188486-21188295 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 228-420 |
| Cow position: | chr29:21249413-21249215 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 236-418 |
| Cow position: | chr29:20003997-20003815 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-418 |
| Cow position: | chr29:21345422-21345604 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-420 |
| Cow position: | chr29:20031519-20031335 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-420 |
| Cow position: | chr29:21201933-21202114 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 236-420 |
| Cow position: | chr29:21229399-21229580 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 237-420 |
| Cow position: | chr29:18741816-18741633 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-418 |
| Cow position: | chr29:19901107-19901287 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-420 |
| Cow position: | chr29:19913769-19913951 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-420 |
| Cow position: | chr29:19979803-19979621 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-420 |
| Cow position: | chr29:19993226-19993044 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-420 |
| Cow position: | chr29:20020426-20020244 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-420 |
| Cow position: | chr29:21272628-21272810 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 238-420 |
| Cow position: | chr29:21296687-21296869 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-420 |
| Cow position: | chr29:19938242-19938422 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 242-420 |
| Cow position: | chr29:21464052-21464230 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 257-420 |
| Cow position: | chr29:21487485-21487648 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-420 |
| Cow position: | chr29:21327826-21327984 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.