Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 450-608
Cow position: chr13:38329374-38329536 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 8

Conread position: 452-610
Cow position: chr13:14063763-14063599 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 452-610
Cow position: chr13:14782106-14782264 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 20, 30

Conread position: 453-605
Cow position: chr13:14927013-14927179 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 55, 28

Conread position: 453-610
Cow position: chr13:53850574-53850746 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 453-612
Cow position: chr13:6189842-6189676 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 132
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 454-610
Cow position: chr13:5660003-5659845 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 68, 27

Conread position: 456-608
Cow position: chr13:37405478-37405631 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 70, 21

Conread position: 456-610
Cow position: chr13:10757902-10758051 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 457-610
Cow position: chr13:151733-151885 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 107, 62

Conread position: 457-611
Cow position: chr13:41474639-41474795 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 94, 65

Conread position: 457-612
Cow position: chr13:21275617-21275783 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 458-604
Cow position: chr13:48165975-48165830 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 64, 85

Conread position: 458-609
Cow position: chr13:37555107-37554952 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 458-610
Cow position: chr13:3594095-3594245 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 87

Conread position: 458-610
Cow position: chr13:17569332-17569179 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 23

Conread position: 458-610
Cow position: chr13:25924465-25924300 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 458-610
Cow position: chr13:51249613-51249458 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 93, 73

Conread position: 458-610
Cow position: chr13:57770219-57770064 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 458-612
Cow position: chr13:38284207-38284055 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 93, 34

Conread position: 459-609
Cow position: chr13:45073481-45073333 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 459-610
Cow position: chr13:19278859-19279017 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 459-610
Cow position: chr13:41979373-41979218 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 103

Conread position: 459-610
Cow position: chr13:57986166-57986016 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 33

Conread position: 460-610
Cow position: chr13:14644819-14644973 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 460-610
Cow position: chr13:15194954-15194813 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 460-610
Cow position: chr13:21170295-21170448 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 62, 21

Conread position: 461-610
Cow position: chr13:23823264-23823112 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 26, 135

Conread position: 461-610
Cow position: chr13:24753660-24753809 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 99

Conread position: 461-610
Cow position: chr13:45439298-45439453 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 461-612
Cow position: chr13:11260044-11260199 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 462-598
Cow position: chr13:41550036-41549896 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 462-610
Cow position: chr13:26097949-26098103 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 462-610
Cow position: chr13:38035608-38035760 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 19

Conread position: 463-607
Cow position: chr13:21981203-21981055 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 140

Conread position: 463-610
Cow position: chr13:54582643-54582796 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 463-612
Cow position: chr13:9124695-9124849 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 143

Conread position: 464-610
Cow position: chr13:5671817-5671664 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 464-610
Cow position: chr13:18058477-18058328 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 117

Conread position: 464-610
Cow position: chr13:33854911-33854762 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 464-610
Cow position: chr13:57322920-57323068 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 17

Conread position: 465-608
Cow position: chr13:21242305-21242164 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 56, 83

Conread position: 465-610
Cow position: chr13:28081487-28081644 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 466-610
Cow position: chr13:27726975-27727115 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 467-607
Cow position: chr13:19883262-19883117 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 13, 105

Conread position: 467-607
Cow position: chr13:52477872-52477727 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 467-610
Cow position: chr13:6951353-6951501 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 45

Conread position: 467-610
Cow position: chr13:9612848-9612991 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 71

Conread position: 467-610
Cow position: chr13:43342340-43342490 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 54, 121

Conread position: 467-610
Cow position: chr13:47651643-47651494 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 468-610
Cow position: chr13:17089739-17089598 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 98

Conread position: 468-610
Cow position: chr13:17611777-17611630 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 468-610
Cow position: chr13:23478674-23478824 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 468-612
Cow position: chr13:6012946-6012802 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 99

Conread position: 469-610
Cow position: chr13:20473900-20473760 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 53, 83

Conread position: 469-610
Cow position: chr13:21277682-21277545 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 83

Conread position: 470-610
Cow position: chr13:1462516-1462370 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 470-610
Cow position: chr13:13320574-13320719 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 15

Conread position: 470-610
Cow position: chr13:21235892-21235749 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 93

Conread position: 470-610
Cow position: chr13:23399542-23399688 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 471-610
Cow position: chr13:22601909-22601771 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 79

Conread position: 472-611
Cow position: chr13:50623033-50622889 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 107

Conread position: 473-610
Cow position: chr13:14575994-14576135 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 473-610
Cow position: chr13:17159103-17158956 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 473-612
Cow position: chr13:11565618-11565761 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 474-606
Cow position: chr13:34261013-34261149 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 88

Conread position: 474-608
Cow position: chr13:25817309-25817447 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 474-610
Cow position: chr13:35526414-35526273 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 45

Conread position: 474-611
Cow position: chr13:972117-971974 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 474-611
Cow position: chr13:10522719-10522860 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 474-611
Cow position: chr13:23667037-23667176 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 52, 36

Conread position: 475-610
Cow position: chr13:17815024-17815160 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 12, 52

Conread position: 475-610
Cow position: chr13:20288120-20288260 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 6

Conread position: 475-610
Cow position: chr13:42200401-42200541 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 477-587
Cow position: chr13:15529462-15529350 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 98
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 45, 91

Conread position: 477-608
Cow position: chr13:37614415-37614276 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 477-610
Cow position: chr13:13265347-13265483 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 103

Conread position: 477-610
Cow position: chr13:17745041-17745170 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 86

Conread position: 477-610
Cow position: chr13:23795597-23795465 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 10, 76

Conread position: 477-610
Cow position: chr13:41806559-41806694 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 44

Conread position: 477-612
Cow position: chr13:50646846-50646707 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 478-610
Cow position: chr13:53619784-53619926 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 480-595
Cow position: chr13:30809589-30809466 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 480-606
Cow position: chr13:27198700-27198826 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 30

Conread position: 480-610
Cow position: chr13:13088818-13088951 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 97

Conread position: 480-610
Cow position: chr13:20784380-20784512 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 89

Conread position: 480-610
Cow position: chr13:22345489-22345352 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 481-606
Cow position: chr13:21288298-21288167 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 481-608
Cow position: chr13:52913663-52913793 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 481-609
Cow position: chr13:15289132-15289000 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 481-610
Cow position: chr13:20821050-20820915 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 483-609
Cow position: chr13:19598876-19598744 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 483-609
Cow position: chr13:26395248-26395382 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 485-610
Cow position: chr13:24585839-24585969 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 485-610
Cow position: chr13:25313358-25313227 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 99

Conread position: 485-610
Cow position: chr13:55494728-55494604 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 486-610
Cow position: chr13:35557319-35557189 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 491-611
Cow position: chr13:20217601-20217475 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.