Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 443-612
Cow position: chr15:12304490-12304666 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 450-610
Cow position: chr15:14576189-14576354 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 75, 63

Conread position: 452-610
Cow position: chr15:23572828-23572660 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 453-610
Cow position: chr15:244645-244807 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 97, 24

Conread position: 453-610
Cow position: chr15:8331336-8331176 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 81

Conread position: 454-610
Cow position: chr15:26442075-26442241 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 456-607
Cow position: chr15:51558269-51558425 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 456-608
Cow position: chr15:14987860-14988014 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 113

Conread position: 457-605
Cow position: chr15:11635283-11635433 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 104

Conread position: 457-610
Cow position: chr15:33642958-33643114 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 39

Conread position: 458-594
Cow position: chr15:16492321-16492465 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 458-610
Cow position: chr15:22553675-22553515 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 458-610
Cow position: chr15:25595661-25595502 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 458-610
Cow position: chr15:36952330-36952177 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 23

Conread position: 458-610
Cow position: chr15:43114851-43114694 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 458-611
Cow position: chr15:13513401-13513559 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 458-612
Cow position: chr15:26851357-26851202 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 109

Conread position: 459-610
Cow position: chr15:40844753-40844594 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 461-607
Cow position: chr15:14505317-14505456 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 461-610
Cow position: chr15:10199202-10199356 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 125
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 18, 125

Conread position: 461-610
Cow position: chr15:20566786-20566941 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 461-610
Cow position: chr15:47920277-47920124 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 80

Conread position: 461-610
Cow position: chr15:53006064-53005913 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 20

Conread position: 462-610
Cow position: chr15:5409023-5408871 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 462-610
Cow position: chr15:11909077-11908920 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 0

Conread position: 462-610
Cow position: chr15:26896828-26896668 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 462-610
Cow position: chr15:36353537-36353694 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 462-610
Cow position: chr15:43715201-43715352 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 463-610
Cow position: chr15:848518-848669 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 463-610
Cow position: chr15:6227305-6227156 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 463-610
Cow position: chr15:22531545-22531693 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 105

Conread position: 463-610
Cow position: chr15:30316688-30316541 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 96

Conread position: 463-612
Cow position: chr15:41534537-41534678 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 464-608
Cow position: chr15:27976000-27975847 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 31

Conread position: 465-608
Cow position: chr15:25208884-25208733 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 16

Conread position: 465-610
Cow position: chr15:28098984-28099138 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 21, 49

Conread position: 465-610
Cow position: chr15:40000800-40000947 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 51, 103

Conread position: 466-610
Cow position: chr15:26849657-26849511 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 96

Conread position: 467-610
Cow position: chr15:1500707-1500854 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 55, 14

Conread position: 467-610
Cow position: chr15:1502790-1502938 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 14

Conread position: 467-610
Cow position: chr15:1508233-1508380 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 14

Conread position: 467-610
Cow position: chr15:18704055-18703909 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 19

Conread position: 467-610
Cow position: chr15:27656978-27657131 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 14

Conread position: 467-610
Cow position: chr15:34223743-34223892 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 468-610
Cow position: chr15:30471102-30470946 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 469-598
Cow position: chr15:29354096-29353961 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 33

Conread position: 469-610
Cow position: chr15:840269-840122 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 469-610
Cow position: chr15:2378320-2378467 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 470-610
Cow position: chr15:5710291-5710428 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 75

Conread position: 470-610
Cow position: chr15:29810003-29810149 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 115

Conread position: 471-605
Cow position: chr15:36846307-36846163 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 471-610
Cow position: chr15:3695517-3695659 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 106

Conread position: 471-610
Cow position: chr15:38827434-38827298 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 10

Conread position: 472-583
Cow position: chr15:19523865-19523983 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 472-609
Cow position: chr15:39598124-39598267 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 472-610
Cow position: chr15:1722961-1722824 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 77

Conread position: 472-610
Cow position: chr15:46563596-46563458 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 96

Conread position: 472-610
Cow position: chr15:49959418-49959557 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 89, 49

Conread position: 473-610
Cow position: chr15:26529778-26529916 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 21

Conread position: 476-608
Cow position: chr15:21903523-21903386 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 477-599
Cow position: chr15:36887724-36887852 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 102

Conread position: 477-610
Cow position: chr15:2931685-2931541 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 477-610
Cow position: chr15:9128781-9128645 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 42, 61

Conread position: 477-610
Cow position: chr15:40835001-40835139 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 477-612
Cow position: chr15:19002397-19002252 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 478-610
Cow position: chr15:41475940-41475804 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 478-612
Cow position: chr15:22532140-22532280 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 480-610
Cow position: chr15:14969407-14969539 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 38, 81

Conread position: 481-608
Cow position: chr15:49784391-49784261 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 481-610
Cow position: chr15:47844198-47844067 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 26

Conread position: 481-612
Cow position: chr15:662574-662440 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 88

Show alignments to all cow chromosomes.