Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 418-607
Cow position: chr17:30501507-30501704 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 10

Conread position: 420-610
Cow position: chr17:24116911-24116713 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 30

Conread position: 434-610
Cow position: chr17:17782338-17782159 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 48, 11

Conread position: 443-610
Cow position: chr17:20881541-20881705 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 118, 18

Conread position: 450-610
Cow position: chr17:34790795-34790960 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 72, 31

Conread position: 454-610
Cow position: chr17:12510714-12510875 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 6, 131

Conread position: 454-610
Cow position: chr17:18720185-18720343 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 456-600
Cow position: chr17:3364852-3364707 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 70, 25

Conread position: 456-610
Cow position: chr17:36864888-36864734 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 70, 110

Conread position: 458-608
Cow position: chr17:24987465-24987312 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 458-608
Cow position: chr17:33154895-33155049 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 105

Conread position: 458-610
Cow position: chr17:12325507-12325661 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 88

Conread position: 458-610
Cow position: chr17:15684766-15684614 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 57

Conread position: 458-610
Cow position: chr17:21039819-21039661 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 0

Conread position: 458-610
Cow position: chr17:27606778-27606621 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 20, 54

Conread position: 458-612
Cow position: chr17:7959441-7959283 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 28

Conread position: 460-610
Cow position: chr17:20929505-20929345 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 461-609
Cow position: chr17:2729658-2729813 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 20

Conread position: 461-610
Cow position: chr17:19543972-19544127 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 146

Conread position: 461-610
Cow position: chr17:21718737-21718893 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 461-610
Cow position: chr17:27922461-27922614 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 461-610
Cow position: chr17:32418856-32419012 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 461-612
Cow position: chr17:36791384-36791228 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 54, 63

Conread position: 462-610
Cow position: chr17:9260352-9260508 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 462-610
Cow position: chr17:24895336-24895177 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 462-610
Cow position: chr17:29282417-29282274 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 60, 37

Conread position: 462-610
Cow position: chr17:30977274-30977124 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 19

Conread position: 462-610
Cow position: chr17:33793412-33793267 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 60

Conread position: 463-607
Cow position: chr17:24898463-24898309 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 463-608
Cow position: chr17:6318611-6318761 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 18

Conread position: 463-608
Cow position: chr17:25800624-25800775 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 136

Conread position: 463-608
Cow position: chr17:29995178-29995330 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 28

Conread position: 464-610
Cow position: chr17:3468008-3467856 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 464-610
Cow position: chr17:8815444-8815296 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 96

Conread position: 464-610
Cow position: chr17:17035203-17035053 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 57, 72

Conread position: 464-610
Cow position: chr17:32993369-32993520 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 464-610
Cow position: chr17:33933491-33933639 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 37, 112

Conread position: 465-592
Cow position: chr17:41144130-41144260 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 77

Conread position: 465-594
Cow position: chr17:12946103-12946232 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 101

Conread position: 465-610
Cow position: chr17:17044078-17044228 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 23, 78

Conread position: 465-610
Cow position: chr17:32349319-32349171 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 465-610
Cow position: chr17:32989730-32989580 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 466-610
Cow position: chr17:32332837-32332987 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 467-609
Cow position: chr17:21466003-21466158 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 467-610
Cow position: chr17:15333430-15333575 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 22

Conread position: 467-610
Cow position: chr17:41289790-41289939 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 468-610
Cow position: chr17:20782944-20783090 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 468-610
Cow position: chr17:42150641-42150495 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 53, 102

Conread position: 468-610
Cow position: chr17:43315037-43315185 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 469-608
Cow position: chr17:6424006-6423870 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 90

Conread position: 469-610
Cow position: chr17:9932059-9932196 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 80

Conread position: 469-610
Cow position: chr17:12201044-12200901 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 101

Conread position: 470-607
Cow position: chr17:13922733-13922596 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 84

Conread position: 470-610
Cow position: chr17:9824919-9824773 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 470-610
Cow position: chr17:11664326-11664479 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 470-610
Cow position: chr17:24974194-24974049 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 470-610
Cow position: chr17:25612338-25612194 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 470-610
Cow position: chr17:30713597-30713449 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 137

Conread position: 470-610
Cow position: chr17:40276987-40276844 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 49

Conread position: 471-610
Cow position: chr17:8809258-8809401 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 471-610
Cow position: chr17:40412829-40412687 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 99

Conread position: 471-612
Cow position: chr17:22051344-22051488 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 12

Conread position: 472-610
Cow position: chr17:1025585-1025721 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 72

Conread position: 472-610
Cow position: chr17:1634245-1634388 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 17

Conread position: 472-610
Cow position: chr17:15103493-15103636 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 37

Conread position: 472-610
Cow position: chr17:18934505-18934363 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 38

Conread position: 473-609
Cow position: chr17:24334696-24334552 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 473-610
Cow position: chr17:21003582-21003725 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 13, 129

Conread position: 474-607
Cow position: chr17:33164573-33164712 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 474-610
Cow position: chr17:3153321-3153471 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 474-610
Cow position: chr17:5372283-5372423 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 12, 96

Conread position: 474-610
Cow position: chr17:22223962-22223819 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 474-610
Cow position: chr17:24786778-24786920 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 474-610
Cow position: chr17:35051867-35051718 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 476-610
Cow position: chr17:946601-946461 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 476-610
Cow position: chr17:35457573-35457711 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 107

Conread position: 477-606
Cow position: chr17:20836334-20836198 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 477-608
Cow position: chr17:25128110-25128247 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 477-608
Cow position: chr17:25511487-25511350 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 477-610
Cow position: chr17:908984-908844 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 477-610
Cow position: chr17:24612889-24612754 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 92

Conread position: 477-610
Cow position: chr17:25473037-25473176 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 477-610
Cow position: chr17:29084412-29084278 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 478-607
Cow position: chr17:37340788-37340924 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 478-608
Cow position: chr17:39606665-39606536 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 478-610
Cow position: chr17:32471547-32471677 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 44, 13

Conread position: 478-611
Cow position: chr17:20930546-20930407 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 130

Conread position: 479-610
Cow position: chr17:10016519-10016383 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 101

Conread position: 479-610
Cow position: chr17:30513769-30513904 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 479-610
Cow position: chr17:30728749-30728608 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 480-612
Cow position: chr17:12963373-12963505 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 109

Conread position: 481-610
Cow position: chr17:20022274-20022410 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 481-610
Cow position: chr17:24587863-24587728 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 485-609
Cow position: chr17:13478368-13478491 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 70

Conread position: 485-610
Cow position: chr17:7711672-7711541 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 485-610
Cow position: chr17:11912269-11912399 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 485-610
Cow position: chr17:31037141-31037273 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 19

Show alignments to all cow chromosomes.