Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 430-610
Cow position: chr18:31672303-31672483 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 92, 27

Conread position: 444-612
Cow position: chr18:56361182-56361353 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 449-612
Cow position: chr18:9089890-9089727 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 31, 110

Conread position: 450-612
Cow position: chr18:2146393-2146551 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 96

Conread position: 451-610
Cow position: chr18:49038648-49038492 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 110, 28

Conread position: 452-610
Cow position: chr18:17390795-17390964 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 456-600
Cow position: chr18:50095218-50095369 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 456-610
Cow position: chr18:48713734-48713581 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 25, 93

Conread position: 458-592
Cow position: chr18:51398143-51398285 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 458-600
Cow position: chr18:18722261-18722116 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 84

Conread position: 458-605
Cow position: chr18:21410876-21410720 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 458-607
Cow position: chr18:22180592-22180744 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 126
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 458-610
Cow position: chr18:247508-247665 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 458-610
Cow position: chr18:1571049-1571207 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 458-610
Cow position: chr18:2793787-2793941 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 63, 104

Conread position: 458-610
Cow position: chr18:31159081-31159243 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 458-610
Cow position: chr18:55505591-55505434 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 33

Conread position: 458-612
Cow position: chr18:37804819-37804667 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 103, 70

Conread position: 459-610
Cow position: chr18:4907331-4907177 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 18

Conread position: 459-610
Cow position: chr18:41257729-41257891 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 459-610
Cow position: chr18:41703027-41702864 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 459-610
Cow position: chr18:45903708-45903867 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 459-612
Cow position: chr18:43400537-43400687 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 79, 0

Conread position: 460-606
Cow position: chr18:6470279-6470129 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 460-610
Cow position: chr18:11791105-11790951 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 47

Conread position: 460-612
Cow position: chr18:19831762-19831610 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 106

Conread position: 461-610
Cow position: chr18:10891697-10891544 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 461-610
Cow position: chr18:45558331-45558178 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 110

Conread position: 461-612
Cow position: chr18:21751567-21751406 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 462-605
Cow position: chr18:47680696-47680547 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 117

Conread position: 462-605
Cow position: chr18:47865253-47865104 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 117

Conread position: 462-610
Cow position: chr18:18592648-18592503 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 18

Conread position: 462-610
Cow position: chr18:32290888-32290742 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 26, 53

Conread position: 462-610
Cow position: chr18:44262808-44262660 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 99

Conread position: 463-610
Cow position: chr18:18844195-18844046 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 97

Conread position: 463-610
Cow position: chr18:48000643-48000796 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 464-599
Cow position: chr18:11618857-11618722 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 97

Conread position: 464-610
Cow position: chr18:4485779-4485629 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 464-610
Cow position: chr18:42431907-42432059 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 464-610
Cow position: chr18:50632262-50632412 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 57, 78

Conread position: 465-610
Cow position: chr18:2553735-2553887 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 465-610
Cow position: chr18:20641319-20641466 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 61, 104

Conread position: 465-610
Cow position: chr18:29091911-29091768 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 89

Conread position: 465-610
Cow position: chr18:44917935-44917787 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 61, 16

Conread position: 465-610
Cow position: chr18:56177100-56176956 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 54

Conread position: 466-610
Cow position: chr18:11691225-11691379 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 466-610
Cow position: chr18:15809629-15809773 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 17, 91

Conread position: 466-610
Cow position: chr18:23630434-23630577 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 82

Conread position: 466-610
Cow position: chr18:43796777-43796925 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 467-605
Cow position: chr18:49017663-49017528 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 82

Conread position: 467-610
Cow position: chr18:46452704-46452848 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 14

Conread position: 467-610
Cow position: chr18:49602862-49603013 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 467-612
Cow position: chr18:11814479-11814332 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 93

Conread position: 468-581
Cow position: chr18:24835029-24834914 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 53, 92

Conread position: 468-610
Cow position: chr18:9010885-9010738 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 468-610
Cow position: chr18:12117674-12117820 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 53, 128

Conread position: 468-610
Cow position: chr18:22789912-22790058 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 13

Conread position: 468-610
Cow position: chr18:25598053-25598202 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 468-610
Cow position: chr18:42479400-42479556 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 469-605
Cow position: chr18:15516997-15517138 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 17

Conread position: 469-606
Cow position: chr18:10905024-10904884 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 12

Conread position: 470-608
Cow position: chr18:34444560-34444704 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 470-609
Cow position: chr18:29065217-29065354 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 57, 14

Conread position: 470-610
Cow position: chr18:11857074-11856931 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 12, 91

Conread position: 470-610
Cow position: chr18:47801919-47802062 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 470-610
Cow position: chr18:50359502-50359362 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 52, 91

Conread position: 471-610
Cow position: chr18:11779827-11779683 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 24

Conread position: 472-610
Cow position: chr18:6102790-6102933 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 19

Conread position: 472-610
Cow position: chr18:9974155-9974298 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 49, 112

Conread position: 472-610
Cow position: chr18:35786228-35786086 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 473-608
Cow position: chr18:14225563-14225426 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 474-610
Cow position: chr18:10977042-10977181 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 474-610
Cow position: chr18:50004533-50004675 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 474-611
Cow position: chr18:35112134-35112276 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 477-610
Cow position: chr18:12059164-12059027 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 477-610
Cow position: chr18:38937990-38937851 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 477-610
Cow position: chr18:47824604-47824743 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 477-610
Cow position: chr18:51383228-51383367 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 478-609
Cow position: chr18:18520632-18520770 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 116
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 478-610
Cow position: chr18:8170922-8171055 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 90

Conread position: 479-610
Cow position: chr18:22568900-22569036 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 480-608
Cow position: chr18:32189350-32189475 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 480-610
Cow position: chr18:28930474-28930606 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 87

Conread position: 480-610
Cow position: chr18:44205927-44206054 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 480-612
Cow position: chr18:28322819-28322685 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 9

Conread position: 480-612
Cow position: chr18:47096589-47096457 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 76, 12

Conread position: 481-608
Cow position: chr18:3132607-3132738 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 82

Conread position: 481-608
Cow position: chr18:9596343-9596215 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 76

Conread position: 481-609
Cow position: chr18:30247839-30247973 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 481-610
Cow position: chr18:10117902-10117770 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 481-612
Cow position: chr18:17007318-17007452 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 481-612
Cow position: chr18:29648946-29648812 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 107

Conread position: 482-612
Cow position: chr18:5647973-5647841 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 66

Conread position: 483-610
Cow position: chr18:15173168-15173043 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 484-610
Cow position: chr18:21143805-21143933 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 78

Conread position: 486-610
Cow position: chr18:39972687-39972561 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 13

Show alignments to all cow chromosomes.