Cow genome map
| Conread name: | Ss1.1-Pig1-34P23.5 | 
| Conread position: | 438-605 | 
| Cow position: | chr3:76056071-76056241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 84, 20 | 
| Conread position: | 450-610 | 
| Cow position: | chr3:17331925-17331761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 166 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 71, 86 | 
| Conread position: | 450-610 | 
| Cow position: | chr3:49363313-49363148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 167 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 30, 37 | 
| Conread position: | 454-610 | 
| Cow position: | chr3:50768880-50768718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 72, 27 | 
| Conread position: | 457-590 | 
| Cow position: | chr3:17401572-17401437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 64, 29 | 
| Conread position: | 457-610 | 
| Cow position: | chr3:53428716-53428878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 457-610 | 
| Cow position: | chr3:66884831-66884991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 457-610 | 
| Cow position: | chr3:75966581-75966745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 458-605 | 
| Cow position: | chr3:75080950-75080805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 103, 68 | 
| Conread position: | 458-608 | 
| Cow position: | chr3:22924182-22924334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 63, 102 | 
| Conread position: | 458-608 | 
| Cow position: | chr3:48072689-48072841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 95, 19 | 
| Conread position: | 458-609 | 
| Cow position: | chr3:54946317-54946171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 458-610 | 
| Cow position: | chr3:57704530-57704372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 458-610 | 
| Cow position: | chr3:61224551-61224705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 158 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 63, 103 | 
| Conread position: | 458-610 | 
| Cow position: | chr3:70402836-70402682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 60, 102 | 
| Conread position: | 458-612 | 
| Cow position: | chr3:65237221-65237061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 459-608 | 
| Cow position: | chr3:76156183-76156028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 459-608 | 
| Cow position: | chr3:82424884-82425038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 63, 33 | 
| Conread position: | 460-608 | 
| Cow position: | chr3:77654115-77653968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 62, 25 | 
| Conread position: | 460-610 | 
| Cow position: | chr3:57641999-57641838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 461-608 | 
| Cow position: | chr3:64197022-64196867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 24, 0 | 
| Conread position: | 461-610 | 
| Cow position: | chr3:59605038-59604882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 4.00001e-40 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 461-612 | 
| Cow position: | chr3:80565163-80565003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 161 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 462-608 | 
| Cow position: | chr3:12705354-12705502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 23 | 
| Conread position: | 462-608 | 
| Cow position: | chr3:74939775-74939627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 65, 107 | 
| Conread position: | 462-610 | 
| Cow position: | chr3:75107966-75107813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 121 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 462-612 | 
| Cow position: | chr3:22165220-22165379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 463-610 | 
| Cow position: | chr3:2016625-2016474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 122 | 
| Conread position: | 463-610 | 
| Cow position: | chr3:27274720-27274567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-37 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 463-610 | 
| Cow position: | chr3:71247207-71247060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 24, 51 | 
| Conread position: | 463-612 | 
| Cow position: | chr3:76168436-76168595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 464-606 | 
| Cow position: | chr3:8540693-8540550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 62, 43 | 
| Conread position: | 464-609 | 
| Cow position: | chr3:26977729-26977579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 57, 48 | 
| Conread position: | 464-612 | 
| Cow position: | chr3:34392033-34392184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 153 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 58, 133 | 
| Conread position: | 465-608 | 
| Cow position: | chr3:59299764-59299617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 465-610 | 
| Cow position: | chr3:23105175-23105323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 63, 16 | 
| Conread position: | 465-610 | 
| Cow position: | chr3:23168876-23169027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 465-610 | 
| Cow position: | chr3:55177560-55177707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 53, 89 | 
| Conread position: | 465-611 | 
| Cow position: | chr3:28323402-28323255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 22, 97 | 
| Conread position: | 465-612 | 
| Cow position: | chr3:51403087-51402938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 152 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 51, 96 | 
| Conread position: | 465-612 | 
| Cow position: | chr3:68156918-68156760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 466-609 | 
| Cow position: | chr3:76270078-76269932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 55, 140 | 
| Conread position: | 466-610 | 
| Cow position: | chr3:39967306-39967450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 466-610 | 
| Cow position: | chr3:64280750-64280891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 60, 20 | 
| Conread position: | 466-612 | 
| Cow position: | chr3:23818677-23818528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 59, 110 | 
| Conread position: | 468-600 | 
| Cow position: | chr3:41826148-41826284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 468-608 | 
| Cow position: | chr3:4549205-4549068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 93, 47 | 
| Conread position: | 468-610 | 
| Cow position: | chr3:44782525-44782378 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 54, 13 | 
| Conread position: | 468-610 | 
| Cow position: | chr3:67407179-67407327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 468-612 | 
| Cow position: | chr3:15689167-15689305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 58, 76 | 
| Conread position: | 469-610 | 
| Cow position: | chr3:27212505-27212360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 469-610 | 
| Cow position: | chr3:59610532-59610679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 469-610 | 
| Cow position: | chr3:75480185-75480038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 469-612 | 
| Cow position: | chr3:75908098-75907949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 470-610 | 
| Cow position: | chr3:8349385-8349524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 55, 40 | 
| Conread position: | 470-610 | 
| Cow position: | chr3:10958058-10958201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 470-610 | 
| Cow position: | chr3:17531550-17531699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 150 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 471-610 | 
| Cow position: | chr3:15950731-15950874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 14, 107 | 
| Conread position: | 471-610 | 
| Cow position: | chr3:17058360-17058507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 148 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 471-610 | 
| Cow position: | chr3:25290026-25289883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 51, 24 | 
| Conread position: | 471-610 | 
| Cow position: | chr3:56943745-56943887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 51, 42 | 
| Conread position: | 471-610 | 
| Cow position: | chr3:58527563-58527421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 15, 90 | 
| Conread position: | 472-606 | 
| Cow position: | chr3:15051768-15051907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 472-610 | 
| Cow position: | chr3:53249669-53249527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 50, 98 | 
| Conread position: | 472-610 | 
| Cow position: | chr3:73701682-73701546 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 89, 25 | 
| Conread position: | 473-607 | 
| Cow position: | chr3:18426518-18426658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 48, 8 | 
| Conread position: | 474-610 | 
| Cow position: | chr3:31804588-31804720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 47, 74 | 
| Conread position: | 475-610 | 
| Cow position: | chr3:18687082-18686945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 47, 93 | 
| Conread position: | 476-609 | 
| Cow position: | chr3:59681726-59681864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 477-607 | 
| Cow position: | chr3:24774821-24774695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 73, 42 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:6182054-6182188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 45, 14 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:8522975-8523115 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 43, 122 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:31115098-31115231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 6, 90 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:31361603-31361464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:36418308-36418445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:45882078-45881937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 477-610 | 
| Cow position: | chr3:74050527-74050663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 45, 72 | 
| Conread position: | 477-612 | 
| Cow position: | chr3:74234360-74234223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 80, 29 | 
| Conread position: | 478-610 | 
| Cow position: | chr3:22868538-22868679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 142 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 478-610 | 
| Cow position: | chr3:24370569-24370440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 9e-27 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 478-610 | 
| Cow position: | chr3:43895885-43896021 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 478-610 | 
| Cow position: | chr3:48363247-48363111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 478-610 | 
| Cow position: | chr3:54506884-54506746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 479-610 | 
| Cow position: | chr3:2637122-2636988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 480-610 | 
| Cow position: | chr3:23408188-23408319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 42, 88 | 
| Conread position: | 480-610 | 
| Cow position: | chr3:26393123-26393261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 480-610 | 
| Cow position: | chr3:59635479-59635351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 38, 72 | 
| Conread position: | 480-610 | 
| Cow position: | chr3:71474231-71474365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 42, 94 | 
| Conread position: | 481-601 | 
| Cow position: | chr3:33002560-33002438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 40, 79 | 
| Conread position: | 481-608 | 
| Cow position: | chr3:56476849-56476723 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 44, 67 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:9641730-9641607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 40, 74 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:22078253-22078114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:23131993-23132130 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:35075047-35074917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 41, 67 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:39969688-39969823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:52845730-52845595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:53222187-53222052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 40, 0 | 
| Conread position: | 481-610 | 
| Cow position: | chr3:77098649-77098784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 481-612 | 
| Cow position: | chr3:53790367-53790500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 482-610 | 
| Cow position: | chr3:15160691-15160559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 483-610 | 
| Cow position: | chr3:68616162-68616291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 38, 86 | 
| Conread position: | 483-612 | 
| Cow position: | chr3:78093220-78093352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 52, 34 | 
| Conread position: | 484-610 | 
| Cow position: | chr3:20021440-20021308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 39, 0 | 
Show alignments to all cow chromosomes.
