Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 436-610
Cow position: chr7:9077521-9077705 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 453-607
Cow position: chr7:38136073-38135919 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 134

Conread position: 453-610
Cow position: chr7:26909495-26909657 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 68, 24

Conread position: 453-610
Cow position: chr7:40263403-40263552 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 454-610
Cow position: chr7:47513418-47513580 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 456-611
Cow position: chr7:6043872-6044032 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 65, 25

Conread position: 457-609
Cow position: chr7:31170694-31170849 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 128
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 0

Conread position: 457-610
Cow position: chr7:5199295-5199446 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 64, 20

Conread position: 457-610
Cow position: chr7:20180930-20181093 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 0

Conread position: 457-610
Cow position: chr7:39988997-39988839 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 24

Conread position: 457-610
Cow position: chr7:55315939-55316097 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 458-610
Cow position: chr7:15559951-15559792 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 458-610
Cow position: chr7:36856800-36856640 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 458-610
Cow position: chr7:40567323-40567176 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 71

Conread position: 460-605
Cow position: chr7:12494859-12495010 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 460-610
Cow position: chr7:12918320-12918475 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 124
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 460-612
Cow position: chr7:25087505-25087350 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 25, 110

Conread position: 461-603
Cow position: chr7:9070713-9070565 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 60, 20

Conread position: 461-610
Cow position: chr7:17750580-17750737 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 461-610
Cow position: chr7:51621652-51621503 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 60, 87

Conread position: 461-612
Cow position: chr7:32946327-32946171 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 462-607
Cow position: chr7:32259936-32260087 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 462-610
Cow position: chr7:9449409-9449551 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 462-610
Cow position: chr7:28441436-28441283 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 462-610
Cow position: chr7:48020685-48020533 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 462-612
Cow position: chr7:30277577-30277435 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 91

Conread position: 463-610
Cow position: chr7:22793594-22793449 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 85

Conread position: 463-610
Cow position: chr7:36284955-36284807 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 23

Conread position: 463-612
Cow position: chr7:21482940-21483078 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 464-608
Cow position: chr7:24736841-24736691 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 464-610
Cow position: chr7:36996616-36996467 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 126

Conread position: 464-610
Cow position: chr7:53053147-53053298 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 464-612
Cow position: chr7:4129530-4129677 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 17

Conread position: 464-612
Cow position: chr7:16022552-16022398 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 464-612
Cow position: chr7:20968683-20968527 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 465-610
Cow position: chr7:17752548-17752695 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 56, 87

Conread position: 465-610
Cow position: chr7:56556896-56557042 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 102

Conread position: 466-600
Cow position: chr7:50860252-50860122 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 52

Conread position: 466-610
Cow position: chr7:6802038-6801881 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 466-610
Cow position: chr7:15570294-15570143 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 466-610
Cow position: chr7:19329053-19329203 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 466-610
Cow position: chr7:30931727-30931872 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 70

Conread position: 466-610
Cow position: chr7:65695052-65695202 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 466-612
Cow position: chr7:33393564-33393412 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 466-612
Cow position: chr7:53702357-53702207 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 467-610
Cow position: chr7:26263399-26263546 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 72

Conread position: 467-610
Cow position: chr7:29300522-29300662 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 24

Conread position: 467-610
Cow position: chr7:29479776-29479632 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 54, 92

Conread position: 467-610
Cow position: chr7:63121160-63121311 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 467-612
Cow position: chr7:50021211-50021355 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 468-606
Cow position: chr7:35088914-35088766 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 469-589
Cow position: chr7:18544137-18544261 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 469-592
Cow position: chr7:34098854-34098724 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 469-610
Cow position: chr7:5914483-5914336 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 469-610
Cow position: chr7:6469879-6469726 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 469-610
Cow position: chr7:46856716-46856858 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 12

Conread position: 469-612
Cow position: chr7:11019213-11019361 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 470-606
Cow position: chr7:24022220-24022354 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 87

Conread position: 470-610
Cow position: chr7:11784793-11784939 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 470-610
Cow position: chr7:40406894-40406754 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 11

Conread position: 470-610
Cow position: chr7:41374452-41374599 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 17, 90

Conread position: 471-609
Cow position: chr7:1763669-1763530 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 50, 84

Conread position: 471-610
Cow position: chr7:5026924-5027065 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 56, 35

Conread position: 471-610
Cow position: chr7:15548281-15548138 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 471-612
Cow position: chr7:14029557-14029412 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 473-609
Cow position: chr7:60083903-60083774 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 473-610
Cow position: chr7:35300173-35300312 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 8

Conread position: 473-610
Cow position: chr7:39416156-39416015 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 7, 90

Conread position: 473-610
Cow position: chr7:49222204-49222337 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 18

Conread position: 474-610
Cow position: chr7:20936378-20936521 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 474-610
Cow position: chr7:37394547-37394403 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 475-610
Cow position: chr7:7510603-7510748 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 475-610
Cow position: chr7:40322854-40322719 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 47, 6

Conread position: 477-600
Cow position: chr7:34216448-34216324 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 33

Conread position: 477-607
Cow position: chr7:12488669-12488541 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 47, 67

Conread position: 477-610
Cow position: chr7:15533837-15533970 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 42

Conread position: 477-610
Cow position: chr7:49105957-49106096 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 477-610
Cow position: chr7:54712661-54712526 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 57, 77

Conread position: 477-612
Cow position: chr7:11796658-11796799 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 478-606
Cow position: chr7:38357405-38357531 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 76

Conread position: 478-610
Cow position: chr7:23671997-23671857 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 478-610
Cow position: chr7:40344633-40344769 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 479-595
Cow position: chr7:59503852-59503729 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 479-612
Cow position: chr7:32884398-32884264 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 114
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 17

Conread position: 481-610
Cow position: chr7:8089403-8089270 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 482-606
Cow position: chr7:10414900-10415025 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 482-610
Cow position: chr7:4765079-4764950 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 43, 78

Conread position: 482-610
Cow position: chr7:31497941-31497815 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 483-610
Cow position: chr7:62497814-62497941 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 54

Conread position: 485-609
Cow position: chr7:48721668-48721799 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 34, 101

Conread position: 485-610
Cow position: chr7:8658751-8658620 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 486-610
Cow position: chr7:58301703-58301834 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 487-610
Cow position: chr7:9660504-9660379 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 28

Conread position: 495-612
Cow position: chr7:14317166-14317045 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 498-610
Cow position: chr7:48667627-48667519 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 51

Show alignments to all cow chromosomes.