Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 438-610
Cow position: chr9:13670426-13670599 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 86, 9

Conread position: 448-610
Cow position: chr9:11873498-11873338 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 450-610
Cow position: chr9:34423416-34423587 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 451-610
Cow position: chr9:26493622-26493775 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 28, 0

Conread position: 454-612
Cow position: chr9:3946346-3946180 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 133

Conread position: 455-610
Cow position: chr9:6237690-6237527 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 130
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 456-607
Cow position: chr9:8066234-8066079 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 114

Conread position: 456-610
Cow position: chr9:4341349-4341193 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 21

Conread position: 457-608
Cow position: chr9:23971089-23970933 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 91

Conread position: 457-610
Cow position: chr9:8998157-8998315 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 458-607
Cow position: chr9:55577518-55577671 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 116

Conread position: 458-608
Cow position: chr9:34286605-34286763 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 458-610
Cow position: chr9:8629104-8628951 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 63, 23

Conread position: 458-610
Cow position: chr9:9091303-9091139 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 458-610
Cow position: chr9:11380838-11380680 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 458-610
Cow position: chr9:63361905-63361753 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 96

Conread position: 459-610
Cow position: chr9:39148890-39149045 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 459-610
Cow position: chr9:41785028-41785176 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 89

Conread position: 459-610
Cow position: chr9:53762505-53762660 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 98

Conread position: 461-599
Cow position: chr9:60036438-60036574 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 20

Conread position: 461-610
Cow position: chr9:7543447-7543297 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 461-610
Cow position: chr9:12268844-12268996 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 41

Conread position: 461-610
Cow position: chr9:28747708-28747554 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 461-610
Cow position: chr9:33584874-33584719 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 461-612
Cow position: chr9:388380-388224 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 462-609
Cow position: chr9:26279362-26279204 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 462-610
Cow position: chr9:24079115-24079268 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 0

Conread position: 462-610
Cow position: chr9:30194822-30194977 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 462-610
Cow position: chr9:45141785-45141634 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 62, 90

Conread position: 462-612
Cow position: chr9:44584412-44584561 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 99

Conread position: 463-599
Cow position: chr9:42608589-42608723 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 85

Conread position: 463-607
Cow position: chr9:17719085-17719226 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 463-610
Cow position: chr9:23956165-23956014 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 463-610
Cow position: chr9:41728070-41728226 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 463-610
Cow position: chr9:42586736-42586590 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 63, 89

Conread position: 463-610
Cow position: chr9:53120816-53120959 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 72

Conread position: 464-608
Cow position: chr9:50382505-50382358 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 57, 72

Conread position: 464-610
Cow position: chr9:6192644-6192494 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 62, 113

Conread position: 464-610
Cow position: chr9:9494974-9495122 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 17

Conread position: 465-610
Cow position: chr9:6189549-6189399 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 465-610
Cow position: chr9:9596138-9595986 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 465-610
Cow position: chr9:28772955-28773105 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 466-600
Cow position: chr9:1338529-1338403 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 466-609
Cow position: chr9:44918463-44918315 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 466-610
Cow position: chr9:20579771-20579628 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 60, 15

Conread position: 466-610
Cow position: chr9:32052092-32052242 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 15

Conread position: 466-610
Cow position: chr9:33248147-33248004 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 77

Conread position: 466-610
Cow position: chr9:39011652-39011503 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 466-610
Cow position: chr9:59013523-59013373 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 467-600
Cow position: chr9:48115086-48115218 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 55

Conread position: 467-610
Cow position: chr9:9403356-9403213 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 54

Conread position: 467-610
Cow position: chr9:53109067-53109217 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 468-610
Cow position: chr9:22360689-22360830 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 0

Conread position: 469-607
Cow position: chr9:5263322-5263463 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 469-610
Cow position: chr9:14519557-14519414 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 89

Conread position: 469-610
Cow position: chr9:19771178-19771328 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 469-610
Cow position: chr9:53323968-53323818 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 17

Conread position: 470-600
Cow position: chr9:11123661-11123527 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 470-610
Cow position: chr9:3378581-3378720 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 72

Conread position: 470-610
Cow position: chr9:58614317-58614460 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 10

Conread position: 470-612
Cow position: chr9:6951931-6952069 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 60

Conread position: 471-610
Cow position: chr9:17872287-17872144 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 471-610
Cow position: chr9:34024519-34024665 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 471-610
Cow position: chr9:59897416-59897559 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 472-610
Cow position: chr9:22440652-22440513 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 96

Conread position: 472-610
Cow position: chr9:51620265-51620411 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 472-612
Cow position: chr9:9516927-9516785 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 49, 104

Conread position: 472-612
Cow position: chr9:35932993-35932846 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 473-610
Cow position: chr9:24887027-24887172 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 474-610
Cow position: chr9:9459812-9459950 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 48, 81

Conread position: 474-612
Cow position: chr9:36627945-36628086 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 109

Conread position: 477-589
Cow position: chr9:61637261-61637372 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 477-599
Cow position: chr9:4241233-4241359 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 477-608
Cow position: chr9:37198953-37199091 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 477-610
Cow position: chr9:33101279-33101149 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 477-610
Cow position: chr9:45369358-45369226 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 84, 41

Conread position: 477-610
Cow position: chr9:55807460-55807597 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 477-610
Cow position: chr9:61302829-61302966 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 477-610
Cow position: chr9:64302806-64302665 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 478-605
Cow position: chr9:34399497-34399632 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 480-610
Cow position: chr9:45740315-45740176 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 481-610
Cow position: chr9:19718504-19718374 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 41, 68

Conread position: 481-610
Cow position: chr9:21460323-21460185 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 481-610
Cow position: chr9:40984334-40984471 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 481-610
Cow position: chr9:55256719-55256586 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 481-610
Cow position: chr9:57131328-57131461 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 482-608
Cow position: chr9:60395218-60395084 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 484-608
Cow position: chr9:26394515-26394385 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 109
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 485-609
Cow position: chr9:64105737-64105864 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 485-610
Cow position: chr9:11098617-11098486 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 109
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 41, 0

Conread position: 487-609
Cow position: chr9:30123766-30123894 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 487-610
Cow position: chr9:32773058-32773179 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 59

Conread position: 495-612
Cow position: chr9:34958208-34958088 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Show alignments to all cow chromosomes.