Cow genome map

Conread name: Ss1.1-Pig1-34P23.5

Conread position: 447-603
Cow position: chrX:5919748-5919593 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 112, 30

Conread position: 450-612
Cow position: chrX:5487689-5487851 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 111

Conread position: 452-610
Cow position: chrX:14135938-14135768 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 452-612
Cow position: chrX:11762754-11762913 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 70, 109

Conread position: 454-610
Cow position: chrX:12437027-12437182 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 31, 99

Conread position: 455-610
Cow position: chrX:32867127-32866965 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 456-610
Cow position: chrX:32942826-32942986 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 20, 63

Conread position: 456-611
Cow position: chrX:46291394-46291234 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 130

Conread position: 457-606
Cow position: chrX:5134725-5134566 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 65, 23

Conread position: 457-606
Cow position: chrX:42216379-42216537 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 457-609
Cow position: chrX:47855227-47855071 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 23

Conread position: 457-610
Cow position: chrX:16984887-16984731 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 65, 137

Conread position: 457-610
Cow position: chrX:40108092-40108253 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 458-610
Cow position: chrX:27446934-27446776 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 458-610
Cow position: chrX:35986066-35985908 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 60

Conread position: 458-610
Cow position: chrX:46910059-46909905 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 459-610
Cow position: chrX:1087897-1088053 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 459-610
Cow position: chrX:20957487-20957328 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 36

Conread position: 459-610
Cow position: chrX:27306691-27306544 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 27, 71

Conread position: 459-610
Cow position: chrX:39353022-39352875 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 89

Conread position: 459-612
Cow position: chrX:231777-231930 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 22

Conread position: 460-610
Cow position: chrX:1466412-1466252 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 460-610
Cow position: chrX:11529589-11529433 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 460-610
Cow position: chrX:42875458-42875302 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 461-600
Cow position: chrX:20666654-20666793 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 93

Conread position: 461-606
Cow position: chrX:42480075-42479927 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 56, 46

Conread position: 461-610
Cow position: chrX:16836046-16836199 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 461-610
Cow position: chrX:27668714-27668868 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 126
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 461-610
Cow position: chrX:40556215-40556369 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 462-606
Cow position: chrX:28940491-28940339 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 462-610
Cow position: chrX:4152797-4152941 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 93

Conread position: 462-610
Cow position: chrX:34836824-34836974 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 22, 51

Conread position: 462-610
Cow position: chrX:45110898-45110746 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 463-605
Cow position: chrX:27270615-27270471 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 55

Conread position: 463-610
Cow position: chrX:6544491-6544344 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 104

Conread position: 463-610
Cow position: chrX:8869158-8869312 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 463-610
Cow position: chrX:34412094-34411936 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 463-610
Cow position: chrX:41215569-41215412 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 463-610
Cow position: chrX:41453545-41453392 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 463-610
Cow position: chrX:41526288-41526439 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 70

Conread position: 463-611
Cow position: chrX:27431679-27431829 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 18

Conread position: 464-607
Cow position: chrX:9650780-9650931 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 464-610
Cow position: chrX:4750093-4750242 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 57, 119

Conread position: 464-610
Cow position: chrX:11656322-11656171 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 58, 17

Conread position: 464-610
Cow position: chrX:12972923-12972773 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 464-610
Cow position: chrX:23136976-23136830 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 73, 59

Conread position: 464-610
Cow position: chrX:42331518-42331374 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 465-610
Cow position: chrX:2936196-2936047 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 16

Conread position: 465-610
Cow position: chrX:5026496-5026346 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 465-610
Cow position: chrX:5118252-5118408 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 465-610
Cow position: chrX:6414277-6414131 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 55

Conread position: 465-610
Cow position: chrX:17956933-17956780 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 465-610
Cow position: chrX:27145844-27145694 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 465-610
Cow position: chrX:43028473-43028322 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 466-610
Cow position: chrX:23358874-23359024 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 466-610
Cow position: chrX:34504810-34504958 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 125

Conread position: 466-610
Cow position: chrX:34532755-34532610 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 45

Conread position: 466-612
Cow position: chrX:34991606-34991452 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 467-610
Cow position: chrX:13177240-13177386 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 15, 45

Conread position: 467-610
Cow position: chrX:19394797-19394643 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 467-610
Cow position: chrX:29050484-29050337 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 467-610
Cow position: chrX:37177110-37176964 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 46

Conread position: 467-610
Cow position: chrX:39290597-39290449 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 112

Conread position: 467-610
Cow position: chrX:39642387-39642532 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 18

Conread position: 467-612
Cow position: chrX:11325867-11326009 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 22

Conread position: 468-610
Cow position: chrX:42927589-42927734 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 469-607
Cow position: chrX:33854985-33855127 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 469-610
Cow position: chrX:20584552-20584418 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 52, 80

Conread position: 469-610
Cow position: chrX:41871298-41871157 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 15, 69

Conread position: 469-610
Cow position: chrX:43059016-43059161 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 102

Conread position: 470-607
Cow position: chrX:38726905-38727046 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 121
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 51, 66

Conread position: 471-608
Cow position: chrX:17525639-17525775 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 471-610
Cow position: chrX:35029698-35029836 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 24

Conread position: 472-610
Cow position: chrX:3494815-3494957 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 50, 9

Conread position: 472-610
Cow position: chrX:27415350-27415490 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 16, 76

Conread position: 472-610
Cow position: chrX:34792086-34792222 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 472-610
Cow position: chrX:43115386-43115240 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 472-612
Cow position: chrX:12979598-12979746 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 473-610
Cow position: chrX:22075031-22074890 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 37

Conread position: 473-610
Cow position: chrX:34314257-34314114 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 473-610
Cow position: chrX:37072622-37072479 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 473-612
Cow position: chrX:4467187-4467055 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 76

Conread position: 474-610
Cow position: chrX:21986065-21986201 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 88

Conread position: 477-610
Cow position: chrX:17744853-17744714 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 477-610
Cow position: chrX:23497465-23497601 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 44, 105

Conread position: 478-610
Cow position: chrX:29681887-29682021 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 74

Conread position: 478-610
Cow position: chrX:31279696-31279834 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 118
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 0

Conread position: 480-610
Cow position: chrX:9201772-9201638 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 38, 77

Conread position: 480-610
Cow position: chrX:31480195-31480058 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 480-610
Cow position: chrX:42380883-42381022 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 32

Conread position: 481-609
Cow position: chrX:4399346-4399210 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 481-610
Cow position: chrX:9251935-9252073 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 481-610
Cow position: chrX:10251974-10252110 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 481-610
Cow position: chrX:20583888-20583756 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 481-610
Cow position: chrX:23471640-23471776 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 481-610
Cow position: chrX:38094298-38094430 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 41, 34

Conread position: 481-610
Cow position: chrX:38560778-38560649 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 70

Conread position: 485-610
Cow position: chrX:38642466-38642339 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 71, 37

Conread position: 487-610
Cow position: chrX:25420546-25420421 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 76

Conread position: 488-610
Cow position: chrX:31436690-31436564 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 38, 0

Conread position: 495-610
Cow position: chrX:39419507-39419624 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 57

Show alignments to all cow chromosomes.