Cow genome map


           Conread name:
           Ss1.1-Pig1-37B21.5
        

               Conread position:
               315-552
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 11
               

               Conread position:
               338-597
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               39, 121
               

               Conread position:
               339-559
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               37, 19
               

               Conread position:
               339-590
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               339-590
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               353-592
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 114
               

               Conread position:
               353-595
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               23, 204
               

               Conread position:
               353-596
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               354-572
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               354-596
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               354-599
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               355-490
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               355-520
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               355-523
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               355-544
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-563
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 90
               

               Conread position:
               355-566
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               21, 66
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               355-586
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 21
               

               Conread position:
               355-587
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               355-587
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               355-587
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               355-589
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               355-590
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               355-590
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               355-592
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               22, 34
               

               Conread position:
               355-593
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 16
               

               Conread position:
               355-594
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               355-594
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               355-595
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 115
               

               Conread position:
               355-595
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               183
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-596
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               355-596
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               355-597
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               146, 57
               

               Conread position:
               355-599
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 108
               

               Conread position:
               355-599
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               355-599
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               7, 86
               

               Conread position:
               355-600
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 214
               

               Conread position:
               356-564
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               356-590
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               356-590
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               128, 94
               

               Conread position:
               356-590
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               356-597
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               356-598
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               21, 162
               

               Conread position:
               356-600
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               21, 47
               

               Conread position:
               357-566
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 99
               

               Conread position:
               357-572
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 98
               

               Conread position:
               357-596
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               358-544
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               19, 147
               

               Conread position:
               358-580
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               358-590
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               19, 57
               

               Conread position:
               358-591
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               17, 68
               

               Conread position:
               358-591
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               358-600
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 85
               

               Conread position:
               360-578
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               361-587
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 33
               

               Conread position:
               362-590
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               362-596
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               363-598
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 200
               

               Conread position:
               365-598
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               372-590
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               111, 90
               

               Conread position:
               374-592
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               375-590
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               109, 19
               

               Conread position:
               379-573
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               124, 30
               

               Conread position:
               383-591
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 116
               

               Conread position:
               384-590
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               384-595
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               385-596
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               120, 185
               

               Conread position:
               388-595
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               389-593
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               6, 65
               

               Conread position:
               390-596
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               391-596
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               108, 62
               

               Conread position:
               394-543
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               397-591
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               397-592
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               104, 175
               

               Conread position:
               397-592
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               398-591
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               106, 20
               

               Conread position:
               399-558
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               105, 17
               

               Conread position:
               406-600
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               410-592
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               415-590
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               420-597
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               18, 51
               

               Conread position:
               428-597
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               432-546
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 57
               

               Conread position:
               434-596
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               436-598
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               454-592
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               462-598
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               463-584
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               463-586
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               463-595
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               463-597
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               476-596
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               486-599
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 51
               
Show alignments to all cow chromosomes.