Cow genome map

Conread name: Ss1.1-Pig1-37B21.5

Conread position: 339-597
Cow position: chr13:30772884-30772628 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 82

Conread position: 350-591
Cow position: chr13:3564254-3564012 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 5, 47

Conread position: 353-598
Cow position: chr13:4947363-4947105 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 24, 101

Conread position: 354-522
Cow position: chr13:17271705-17271875 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 91

Conread position: 354-527
Cow position: chr13:57313870-57313696 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 66

Conread position: 354-586
Cow position: chr13:46710976-46711209 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 23, 109

Conread position: 354-590
Cow position: chr13:45511283-45511046 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 106

Conread position: 354-593
Cow position: chr13:22976940-22976701 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 36

Conread position: 354-597
Cow position: chr13:15731228-15730972 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 23, 97

Conread position: 355-544
Cow position: chr13:23534062-23534249 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 42

Conread position: 355-567
Cow position: chr13:25981519-25981311 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 21, 65

Conread position: 355-576
Cow position: chr13:20490274-20490051 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 47

Conread position: 355-579
Cow position: chr13:1639203-1639429 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 97

Conread position: 355-587
Cow position: chr13:16040989-16040768 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 21, 100

Conread position: 355-587
Cow position: chr13:19427170-19427405 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 11

Conread position: 355-590
Cow position: chr13:11522984-11522753 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 92

Conread position: 355-590
Cow position: chr13:21677187-21676948 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 355-591
Cow position: chr13:26983598-26983369 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 22, 100

Conread position: 355-591
Cow position: chr13:33767712-33767482 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 216, 9

Conread position: 355-592
Cow position: chr13:25883264-25883496 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 21, 41

Conread position: 355-597
Cow position: chr13:11570650-11570403 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 190
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 77

Conread position: 355-598
Cow position: chr13:5776717-5776958 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 70

Conread position: 355-598
Cow position: chr13:17127414-17127169 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 108

Conread position: 355-598
Cow position: chr13:61121473-61121714 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 22, 85

Conread position: 356-577
Cow position: chr13:18052329-18052553 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 175
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 21, 13

Conread position: 356-580
Cow position: chr13:6178404-6178630 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 99

Conread position: 356-586
Cow position: chr13:19252074-19252302 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 170
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 22, 40

Conread position: 356-589
Cow position: chr13:15704403-15704177 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 43

Conread position: 357-565
Cow position: chr13:56516679-56516470 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 68

Conread position: 358-560
Cow position: chr13:29650712-29650504 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 157
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 358-563
Cow position: chr13:9714753-9714955 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 101

Conread position: 358-598
Cow position: chr13:46131672-46131436 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 19, 38

Conread position: 359-598
Cow position: chr13:29671670-29671910 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 17

Conread position: 361-600
Cow position: chr13:16342899-16342665 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 72, 16

Conread position: 363-598
Cow position: chr13:18047153-18046925 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 13, 69

Conread position: 364-534
Cow position: chr13:24739979-24740150 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 11, 97

Conread position: 364-579
Cow position: chr13:9716282-9716503 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 96

Conread position: 375-586
Cow position: chr13:3167596-3167394 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 78, 0

Conread position: 375-591
Cow position: chr13:47371253-47371456 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 209, 19

Conread position: 379-553
Cow position: chr13:41902868-41902700 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 125, 18

Conread position: 379-573
Cow position: chr13:24216308-24216123 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 192, 28

Conread position: 388-585
Cow position: chr13:1424051-1424253 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 160
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 92

Conread position: 394-587
Cow position: chr13:4441471-4441271 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 153
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 29

Conread position: 394-596
Cow position: chr13:22459781-22459589 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 398-591
Cow position: chr13:17319706-17319510 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 25

Conread position: 398-591
Cow position: chr13:56929591-56929782 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 130

Conread position: 400-598
Cow position: chr13:2942102-2942296 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 156
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 401-576
Cow position: chr13:9343093-9342918 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 100, 60

Conread position: 401-590
Cow position: chr13:6923891-6924076 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 402-527
Cow position: chr13:62264180-62264306 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 100, 68

Conread position: 407-585
Cow position: chr13:24689522-24689352 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 169, 18

Conread position: 415-563
Cow position: chr13:31453817-31453670 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 38

Conread position: 415-596
Cow position: chr13:59492452-59492631 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 417-592
Cow position: chr13:9167334-9167511 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 84, 44

Conread position: 417-599
Cow position: chr13:22014512-22014689 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 87, 41

Conread position: 421-592
Cow position: chr13:11921329-11921500 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 83, 37

Conread position: 427-554
Cow position: chr13:26011079-26011211 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 432-598
Cow position: chr13:29961735-29961891 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 439-592
Cow position: chr13:9147403-9147559 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 19

Conread position: 442-581
Cow position: chr13:32985781-32985920 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 115
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 61, 17

Conread position: 445-595
Cow position: chr13:25452073-25452219 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 463-586
Cow position: chr13:38362183-38362060 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 463-588
Cow position: chr13:8960283-8960155 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 463-592
Cow position: chr13:37497827-37497956 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 463-592
Cow position: chr13:39487424-39487548 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 465-589
Cow position: chr13:28598673-28598800 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 472-587
Cow position: chr13:32118043-32118158 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 94

Show alignments to all cow chromosomes.