Cow genome map

Conread name: Ss1.1-Pig1-37B21.5

Conread position: 339-525
Cow position: chr17:5226480-5226289 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 18, 65

Conread position: 339-598
Cow position: chr17:14303663-14303402 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 196
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 220

Conread position: 343-582
Cow position: chr17:38835555-38835791 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 19, 122

Conread position: 353-503
Cow position: chr17:3139923-3140075 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 24, 0

Conread position: 354-548
Cow position: chr17:16191977-16192170 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 23, 95

Conread position: 354-592
Cow position: chr17:37722768-37722527 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 354-596
Cow position: chr17:13671321-13671075 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 120

Conread position: 355-560
Cow position: chr17:485447-485656 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 165
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 22, 148

Conread position: 355-560
Cow position: chr17:10041034-10040828 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 22, 32

Conread position: 355-565
Cow position: chr17:14009272-14009064 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 21, 89

Conread position: 355-579
Cow position: chr17:35619271-35619033 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 162

Conread position: 355-591
Cow position: chr17:7683977-7684212 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 175
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 22, 41

Conread position: 355-596
Cow position: chr17:5156102-5155860 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 134

Conread position: 355-598
Cow position: chr17:35457986-35458221 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 22, 48

Conread position: 355-600
Cow position: chr17:10831125-10830884 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 22, 185

Conread position: 355-600
Cow position: chr17:24337227-24337471 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 22, 57

Conread position: 356-593
Cow position: chr17:27940198-27939960 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 189

Conread position: 356-596
Cow position: chr17:5248513-5248758 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 20, 62

Conread position: 356-600
Cow position: chr17:19366401-19366648 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 177
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 64

Conread position: 358-590
Cow position: chr17:41024755-41024994 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 358-600
Cow position: chr17:226159-226400 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 146, 65

Conread position: 358-600
Cow position: chr17:9348703-9348951 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 19, 243

Conread position: 362-533
Cow position: chr17:28403972-28403800 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 94

Conread position: 368-598
Cow position: chr17:33369947-33369730 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 111

Conread position: 376-508
Cow position: chr17:4658467-4658595 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 376-595
Cow position: chr17:23723941-23724161 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 82

Conread position: 380-589
Cow position: chr17:34322576-34322371 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 105, 29

Conread position: 382-594
Cow position: chr17:39482665-39482867 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 37

Conread position: 384-598
Cow position: chr17:28800288-28800060 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 174
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 65, 0

Conread position: 387-598
Cow position: chr17:35038594-35038805 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 164
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 109, 127

Conread position: 398-598
Cow position: chr17:3174956-3175149 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 61

Conread position: 401-502
Cow position: chr17:27234370-27234471 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 401-593
Cow position: chr17:16222229-16222039 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 87, 58

Conread position: 412-600
Cow position: chr17:6779466-6779657 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 53, 65

Conread position: 417-560
Cow position: chr17:7071914-7072060 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 417-595
Cow position: chr17:30788488-30788667 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 87, 36

Conread position: 432-589
Cow position: chr17:7599813-7599650 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 453-600
Cow position: chr17:5317907-5318060 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 462-599
Cow position: chr17:4330736-4330871 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 463-560
Cow position: chr17:7559532-7559437 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 463-591
Cow position: chr17:11374571-11374440 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 463-600
Cow position: chr17:8035844-8035985 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 466-595
Cow position: chr17:1310127-1309995 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 466-598
Cow position: chr17:20208698-20208564 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 33, 79

Conread position: 473-599
Cow position: chr17:31427934-31428063 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.