Cow genome map
| Conread name: | Ss1.1-Pig1-37B21.5 |
| Conread position: | 339-597 |
| Cow position: | chr19:36010310-36010559 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 21, 60 |
| Conread position: | 351-591 |
| Cow position: | chr19:39942545-39942301 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 353-577 |
| Cow position: | chr19:14104434-14104663 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 22, 189 |
| Conread position: | 353-585 |
| Cow position: | chr19:39199133-39199367 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 206 |
| Conread position: | 353-592 |
| Cow position: | chr19:19458788-19458555 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 23, 163 |
| Conread position: | 355-519 |
| Cow position: | chr19:2762679-2762517 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 355-558 |
| Cow position: | chr19:12375023-12374823 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 355-570 |
| Cow position: | chr19:41830139-41829929 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 19, 116 |
| Conread position: | 355-579 |
| Cow position: | chr19:21058575-21058349 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 355-592 |
| Cow position: | chr19:5551881-5551645 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 201 |
| Conread position: | 355-592 |
| Cow position: | chr19:32887049-32887301 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 22, 115 |
| Conread position: | 355-598 |
| Cow position: | chr19:15244603-15244364 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 22, 123 |
| Conread position: | 355-598 |
| Cow position: | chr19:21023312-21023555 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 47, 21 |
| Conread position: | 356-541 |
| Cow position: | chr19:35955301-35955103 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 356-576 |
| Cow position: | chr19:39601941-39601729 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 43 |
| Conread position: | 356-590 |
| Cow position: | chr19:23908138-23907905 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 356-591 |
| Cow position: | chr19:22422982-22422756 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 357-589 |
| Cow position: | chr19:15494503-15494274 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 358-522 |
| Cow position: | chr19:7338236-7338394 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 18, 68 |
| Conread position: | 361-542 |
| Cow position: | chr19:2994089-2993904 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 11, 49 |
| Conread position: | 361-593 |
| Cow position: | chr19:24770273-24770500 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 361-597 |
| Cow position: | chr19:48218049-48217805 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 104 |
| Conread position: | 362-598 |
| Cow position: | chr19:6328886-6329118 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 85 |
| Conread position: | 373-586 |
| Cow position: | chr19:42499090-42498865 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 375-546 |
| Cow position: | chr19:23874807-23874632 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 375-580 |
| Cow position: | chr19:20314413-20314214 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 376-598 |
| Cow position: | chr19:56312859-56313079 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 119, 143 |
| Conread position: | 377-577 |
| Cow position: | chr19:24714024-24713832 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 74, 41 |
| Conread position: | 378-577 |
| Cow position: | chr19:10567099-10567301 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 385-592 |
| Cow position: | chr19:23528134-23528329 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 385-598 |
| Cow position: | chr19:9005689-9005479 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 116, 73 |
| Conread position: | 388-580 |
| Cow position: | chr19:9097103-9096906 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 115, 56 |
| Conread position: | 398-593 |
| Cow position: | chr19:51108063-51108260 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 177 |
| Conread position: | 402-581 |
| Cow position: | chr19:10112862-10113048 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 412-594 |
| Cow position: | chr19:6093975-6094154 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 415-590 |
| Cow position: | chr19:33440941-33440762 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 147 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 417-579 |
| Cow position: | chr19:43067553-43067727 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 417-587 |
| Cow position: | chr19:12107847-12108011 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 417-592 |
| Cow position: | chr19:5022415-5022241 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 25 |
| Conread position: | 420-597 |
| Cow position: | chr19:39722401-39722576 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 420-600 |
| Cow position: | chr19:46685519-46685703 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 69 |
| Conread position: | 426-591 |
| Cow position: | chr19:4500520-4500355 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 21 |
| Conread position: | 427-577 |
| Cow position: | chr19:23339663-23339512 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 440-589 |
| Cow position: | chr19:33847793-33847945 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 446-558 |
| Cow position: | chr19:36465832-36465943 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 450-592 |
| Cow position: | chr19:3585163-3585023 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 463-600 |
| Cow position: | chr19:20700156-20700294 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 36, 127 |
| Conread position: | 464-600 |
| Cow position: | chr19:29349983-29350121 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 133 |
| Conread position: | 500-600 |
| Cow position: | chr19:13633303-13633203 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.