Cow genome map

Conread name: Ss1.1-Pig1-37B21.5

Conread position: 319-598
Cow position: chr22:16104775-16105049 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 14, 139

Conread position: 338-586
Cow position: chr22:23669385-23669132 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 183
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 11

Conread position: 339-523
Cow position: chr22:44502604-44502418 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 112, 20

Conread position: 351-587
Cow position: chr22:20912241-20912006 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 184
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 26, 45

Conread position: 353-600
Cow position: chr22:12086383-12086130 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 24, 150

Conread position: 353-600
Cow position: chr22:14923152-14922904 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 24, 179

Conread position: 354-579
Cow position: chr22:23228260-23228031 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 354-590
Cow position: chr22:22045966-22046199 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 31

Conread position: 354-590
Cow position: chr22:42883650-42883412 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 98

Conread position: 354-600
Cow position: chr22:28138658-28138899 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 23, 67

Conread position: 355-494
Cow position: chr22:7924188-7924326 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 19, 65

Conread position: 355-507
Cow position: chr22:35236364-35236517 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 138

Conread position: 355-577
Cow position: chr22:18843514-18843289 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 99

Conread position: 355-580
Cow position: chr22:34797060-34797288 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 156
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 22, 86

Conread position: 355-589
Cow position: chr22:11306400-11306632 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 22, 91

Conread position: 355-592
Cow position: chr22:3288766-3289002 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 182
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 22, 71

Conread position: 355-592
Cow position: chr22:19736967-19736741 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 79

Conread position: 355-595
Cow position: chr22:15373194-15373444 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 149

Conread position: 355-596
Cow position: chr22:13250072-13250315 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 188
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 16, 102

Conread position: 355-596
Cow position: chr22:14154672-14154433 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 22, 105

Conread position: 355-598
Cow position: chr22:25673023-25672776 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 169

Conread position: 356-553
Cow position: chr22:40745534-40745735 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 24, 0

Conread position: 356-589
Cow position: chr22:6014121-6013886 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 108

Conread position: 356-592
Cow position: chr22:13997787-13998024 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 105

Conread position: 356-592
Cow position: chr22:18326587-18326348 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 24, 68

Conread position: 357-578
Cow position: chr22:36755919-36756147 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 172
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 143

Conread position: 358-596
Cow position: chr22:33603333-33603567 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 186
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 19, 37

Conread position: 358-598
Cow position: chr22:32529452-32529694 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 19, 39

Conread position: 358-599
Cow position: chr22:15879645-15879886 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 37

Conread position: 360-598
Cow position: chr22:11968961-11968737 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 16, 34

Conread position: 363-587
Cow position: chr22:36359497-36359731 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 14, 63

Conread position: 376-595
Cow position: chr22:18166507-18166720 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 49

Conread position: 384-598
Cow position: chr22:34886710-34886922 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 69

Conread position: 385-600
Cow position: chr22:25168085-25167849 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 176
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 394-592
Cow position: chr22:23345530-23345329 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 0

Conread position: 402-591
Cow position: chr22:46735832-46735643 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 92

Conread position: 402-598
Cow position: chr22:33509432-33509236 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 57

Conread position: 409-591
Cow position: chr22:15424765-15424940 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 86, 72

Conread position: 409-597
Cow position: chr22:40715080-40715273 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 159

Conread position: 410-595
Cow position: chr22:4190102-4189913 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 134

Conread position: 411-592
Cow position: chr22:24595788-24595609 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 91, 47

Conread position: 413-592
Cow position: chr22:4035293-4035470 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 48, 0

Conread position: 415-598
Cow position: chr22:27452340-27452162 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 47

Conread position: 416-597
Cow position: chr22:37224711-37224886 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 93, 19

Conread position: 417-579
Cow position: chr22:47562672-47562513 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 22

Conread position: 417-591
Cow position: chr22:13665653-13665822 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 45

Conread position: 420-595
Cow position: chr22:12576207-12576385 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 420-600
Cow position: chr22:38296469-38296648 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 43, 128

Conread position: 431-585
Cow position: chr22:9998915-9999073 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 436-597
Cow position: chr22:12775010-12775173 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 38

Conread position: 437-599
Cow position: chr22:12345482-12345322 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 14, 63

Conread position: 461-598
Cow position: chr22:43044092-43043951 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 463-590
Cow position: chr22:12628416-12628286 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 463-592
Cow position: chr22:610224-610356 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 463-592
Cow position: chr22:35143315-35143445 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 463-596
Cow position: chr22:19247301-19247437 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 463-600
Cow position: chr22:25404906-25404765 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 13

Conread position: 483-598
Cow position: chr22:14363546-14363664 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Show alignments to all cow chromosomes.