Cow genome map

Conread name: Ss1.1-Pig1-37B21.5

Conread position: 329-590
Cow position: chr24:41009736-41010002 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 18, 134

Conread position: 338-598
Cow position: chr24:16162800-16163062 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 125

Conread position: 339-598
Cow position: chr24:25049831-25049564 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 38, 238

Conread position: 351-600
Cow position: chr24:5691859-5692120 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 7, 20

Conread position: 353-520
Cow position: chr24:39209665-39209837 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 354-493
Cow position: chr24:23820337-23820200 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 49

Conread position: 354-580
Cow position: chr24:29070174-29069951 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 72

Conread position: 355-503
Cow position: chr24:37080413-37080272 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 40

Conread position: 355-560
Cow position: chr24:2615945-2616147 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 73

Conread position: 355-577
Cow position: chr24:16190446-16190670 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 355-586
Cow position: chr24:38473430-38473187 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 165
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 197

Conread position: 355-587
Cow position: chr24:7464419-7464190 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 172
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 130, 16

Conread position: 355-590
Cow position: chr24:16590414-16590646 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 33

Conread position: 355-590
Cow position: chr24:36715530-36715759 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 70

Conread position: 355-592
Cow position: chr24:7787494-7787736 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 189
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 21, 125

Conread position: 355-592
Cow position: chr24:31393798-31393559 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 22, 32

Conread position: 355-592
Cow position: chr24:44255894-44256137 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 124

Conread position: 355-599
Cow position: chr24:43176506-43176752 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 65

Conread position: 355-600
Cow position: chr24:44502989-44502728 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 356-537
Cow position: chr24:17470019-17470201 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 103

Conread position: 356-598
Cow position: chr24:18793455-18793695 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 171
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 10

Conread position: 356-600
Cow position: chr24:12046589-12046846 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 175
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 246

Conread position: 357-587
Cow position: chr24:23528298-23528066 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 19, 83

Conread position: 357-590
Cow position: chr24:31420844-31421081 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 160
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 20, 89

Conread position: 358-576
Cow position: chr24:37074624-37074407 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 19, 102

Conread position: 359-592
Cow position: chr24:5873637-5873400 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 7, 88

Conread position: 359-600
Cow position: chr24:27229059-27228825 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 19, 76

Conread position: 361-596
Cow position: chr24:13783472-13783240 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 14, 50

Conread position: 361-598
Cow position: chr24:27884348-27884117 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 140, 15

Conread position: 362-536
Cow position: chr24:7030128-7029953 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 101

Conread position: 362-582
Cow position: chr24:19784773-19784987 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 42

Conread position: 362-591
Cow position: chr24:5376066-5375841 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 13, 108

Conread position: 363-591
Cow position: chr24:39556238-39556457 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 12, 92

Conread position: 365-599
Cow position: chr24:16235197-16235431 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 12

Conread position: 372-596
Cow position: chr24:17999893-18000099 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 216, 7

Conread position: 372-600
Cow position: chr24:16101743-16101964 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 133, 5

Conread position: 375-578
Cow position: chr24:36344678-36344457 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 80

Conread position: 375-579
Cow position: chr24:10460387-10460592 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 155
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 74, 79

Conread position: 375-600
Cow position: chr24:23012861-23013081 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 67

Conread position: 375-600
Cow position: chr24:30017537-30017310 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 76, 191

Conread position: 376-596
Cow position: chr24:17896895-17897125 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 86, 0

Conread position: 377-563
Cow position: chr24:24777377-24777560 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 127, 41

Conread position: 377-587
Cow position: chr24:27078774-27078983 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 128, 72

Conread position: 377-596
Cow position: chr24:31590045-31589836 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 378-591
Cow position: chr24:38146092-38145879 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 73, 125

Conread position: 382-591
Cow position: chr24:26906258-26906468 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 113, 71

Conread position: 383-560
Cow position: chr24:30191677-30191855 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 145
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 117, 78

Conread position: 383-600
Cow position: chr24:2075740-2075955 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 167
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 214, 54

Conread position: 385-591
Cow position: chr24:26255289-26255483 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 121, 22

Conread position: 385-592
Cow position: chr24:15483246-15483449 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 68, 0

Conread position: 398-599
Cow position: chr24:3530065-3530270 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 8, 64

Conread position: 398-600
Cow position: chr24:5531854-5532058 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 58, 37

Conread position: 406-597
Cow position: chr24:35556544-35556342 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 43, 195

Conread position: 409-597
Cow position: chr24:10588202-10588022 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 44

Conread position: 412-585
Cow position: chr24:31438126-31437963 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 41

Conread position: 417-548
Cow position: chr24:21503866-21503736 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 42

Conread position: 417-582
Cow position: chr24:36343668-36343827 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 417-598
Cow position: chr24:22201736-22201546 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 150
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 34, 161

Conread position: 420-600
Cow position: chr24:20162597-20162776 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 38

Conread position: 427-597
Cow position: chr24:32418644-32418473 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 32

Conread position: 429-579
Cow position: chr24:34721401-34721544 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 32

Conread position: 430-598
Cow position: chr24:20320951-20320787 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 454-598
Cow position: chr24:7594028-7594173 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 9, 19

Conread position: 454-600
Cow position: chr24:38001702-38001551 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 10, 73

Conread position: 464-598
Cow position: chr24:37480263-37480131 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 26

Conread position: 466-598
Cow position: chr24:43492442-43492310 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 121

Conread position: 473-600
Cow position: chr24:16476786-16476916 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Show alignments to all cow chromosomes.