Cow genome map
| Conread name: | Ss1.1-Pig1-37B21.5 |
| Conread position: | 349-576 |
| Cow position: | chr25:23671866-23671633 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 349-576 |
| Cow position: | chr25:23739240-23739012 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 27, 10 |
| Conread position: | 350-589 |
| Cow position: | chr25:33402478-33402715 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 101 |
| Conread position: | 351-586 |
| Cow position: | chr25:33094357-33094587 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 353-597 |
| Cow position: | chr25:35262539-35262292 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 24, 210 |
| Conread position: | 355-585 |
| Cow position: | chr25:33325936-33326173 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 355-587 |
| Cow position: | chr25:9573150-9572909 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 355-587 |
| Cow position: | chr25:18262422-18262193 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 355-588 |
| Cow position: | chr25:6471-6707 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 67 |
| Conread position: | 355-591 |
| Cow position: | chr25:17726899-17726676 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 22, 65 |
| Conread position: | 355-592 |
| Cow position: | chr25:13224622-13224865 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 355-595 |
| Cow position: | chr25:23772201-23771969 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 355-598 |
| Cow position: | chr25:5534118-5533874 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 355-598 |
| Cow position: | chr25:11962166-11962411 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 23, 56 |
| Conread position: | 356-590 |
| Cow position: | chr25:21961001-21960770 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 356-591 |
| Cow position: | chr25:21225406-21225650 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 357-590 |
| Cow position: | chr25:31515572-31515806 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 19, 89 |
| Conread position: | 358-598 |
| Cow position: | chr25:9625825-9626061 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 24, 106 |
| Conread position: | 359-590 |
| Cow position: | chr25:21068646-21068413 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 375-551 |
| Cow position: | chr25:29523243-29523067 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 83 |
| Conread position: | 384-598 |
| Cow position: | chr25:11188829-11189040 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 394-596 |
| Cow position: | chr25:18467294-18467498 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 69, 15 |
| Conread position: | 397-590 |
| Cow position: | chr25:33953665-33953472 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 53 |
| Conread position: | 397-590 |
| Cow position: | chr25:36841525-36841337 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 98, 70 |
| Conread position: | 398-596 |
| Cow position: | chr25:40828865-40828664 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 108, 55 |
| Conread position: | 400-540 |
| Cow position: | chr25:36096398-36096257 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 95, 53 |
| Conread position: | 411-599 |
| Cow position: | chr25:25716207-25716402 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 45, 164 |
| Conread position: | 446-598 |
| Cow position: | chr25:8422706-8422858 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 60, 15 |
| Conread position: | 448-599 |
| Cow position: | chr25:4188658-4188503 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 453-592 |
| Cow position: | chr25:14279338-14279480 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 462-596 |
| Cow position: | chr25:12755221-12755085 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 63 |
| Conread position: | 463-581 |
| Cow position: | chr25:17660340-17660461 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 463-596 |
| Cow position: | chr25:18643991-18643855 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 463-596 |
| Cow position: | chr25:26486536-26486672 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 463-597 |
| Cow position: | chr25:23842331-23842468 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 463-598 |
| Cow position: | chr25:34236494-34236358 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 38, 86 |
| Conread position: | 472-598 |
| Cow position: | chr25:12754722-12754847 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 116, 45 |
Show alignments to all cow chromosomes.