Cow genome map
| Conread name: | Ss1.1-Pig1-37B21.5 |
| Conread position: | 338-588 |
| Cow position: | chr27:26348996-26349246 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 73 |
| Conread position: | 351-548 |
| Cow position: | chr27:28924815-28925006 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 351-592 |
| Cow position: | chr27:14910729-14910974 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 113 |
| Conread position: | 353-560 |
| Cow position: | chr27:9917964-9917763 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 24, 48 |
| Conread position: | 353-598 |
| Cow position: | chr27:31262714-31262963 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 24, 118 |
| Conread position: | 355-587 |
| Cow position: | chr27:17924372-17924608 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 99 |
| Conread position: | 355-591 |
| Cow position: | chr27:13921862-13922087 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 355-594 |
| Cow position: | chr27:4295589-4295836 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 355-596 |
| Cow position: | chr27:16100075-16100322 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 355-596 |
| Cow position: | chr27:17443036-17443280 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 356-591 |
| Cow position: | chr27:25731722-25731490 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 24, 138 |
| Conread position: | 356-598 |
| Cow position: | chr27:12261338-12261097 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 19, 105 |
| Conread position: | 356-600 |
| Cow position: | chr27:8589604-8589840 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 357-590 |
| Cow position: | chr27:14890980-14891216 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 357-591 |
| Cow position: | chr27:1088194-1087957 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 20, 103 |
| Conread position: | 357-596 |
| Cow position: | chr27:28685079-28684845 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 145, 96 |
| Conread position: | 357-597 |
| Cow position: | chr27:10017731-10017498 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 357-598 |
| Cow position: | chr27:14867294-14867536 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 358-591 |
| Cow position: | chr27:20012691-20012912 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 19, 62 |
| Conread position: | 362-520 |
| Cow position: | chr27:30149758-30149917 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 93 |
| Conread position: | 366-590 |
| Cow position: | chr27:12879642-12879863 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 379-577 |
| Cow position: | chr27:23955411-23955207 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 384-531 |
| Cow position: | chr27:16429090-16429230 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 390-598 |
| Cow position: | chr27:13635973-13635763 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 164 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 112, 71 |
| Conread position: | 394-527 |
| Cow position: | chr27:10998573-10998708 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 394-593 |
| Cow position: | chr27:19960916-19960723 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 397-554 |
| Cow position: | chr27:4427882-4428034 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 80, 48 |
| Conread position: | 397-592 |
| Cow position: | chr27:776148-775951 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 98, 62 |
| Conread position: | 410-558 |
| Cow position: | chr27:26573158-26573016 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 413-559 |
| Cow position: | chr27:30894176-30894321 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 45 |
| Conread position: | 417-599 |
| Cow position: | chr27:21245971-21245785 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 13 |
| Conread position: | 433-600 |
| Cow position: | chr27:6292249-6292085 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 459-593 |
| Cow position: | chr27:12440864-12440727 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 130 |
| Conread position: | 463-598 |
| Cow position: | chr27:4007385-4007523 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 473-587 |
| Cow position: | chr27:1142173-1142291 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 476-592 |
| Cow position: | chr27:8967673-8967557 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.