Cow genome map

Conread name: Ss1.1-Pig1-37B21.5

Conread position: 306-598
Cow position: chr29:35286848-35287131 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 93

Conread position: 313-598
Cow position: chr29:4755062-4754770 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 211
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 43, 21

Conread position: 351-585
Cow position: chr29:25681123-25680898 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 26, 45

Conread position: 351-598
Cow position: chr29:24778858-24778614 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 24, 106

Conread position: 353-590
Cow position: chr29:16153554-16153790 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 120

Conread position: 354-575
Cow position: chr29:26250544-26250773 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Conread position: 354-597
Cow position: chr29:16359959-16360209 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 172
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 23, 59

Conread position: 355-533
Cow position: chr29:7971320-7971141 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 100

Conread position: 355-560
Cow position: chr29:34848923-34849129 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 158
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 22, 112

Conread position: 355-564
Cow position: chr29:7749851-7749638 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 166
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 22, 100

Conread position: 355-594
Cow position: chr29:34683243-34683000 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 189
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 21, 51

Conread position: 356-560
Cow position: chr29:35111969-35111762 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 21, 34

Conread position: 356-579
Cow position: chr29:19751376-19751589 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 23, 87

Conread position: 356-580
Cow position: chr29:15919896-15920115 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 21, 177

Conread position: 356-580
Cow position: chr29:26224370-26224595 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 177
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 21, 12

Conread position: 357-598
Cow position: chr29:37683516-37683769 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 18, 225

Conread position: 357-600
Cow position: chr29:30844774-30845022 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 46, 19

Conread position: 358-570
Cow position: chr29:24777290-24777075 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 17, 37

Conread position: 358-576
Cow position: chr29:15562989-15562759 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 19, 122

Conread position: 358-581
Cow position: chr29:13608616-13608389 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 19, 94

Conread position: 358-598
Cow position: chr29:32912624-32912394 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 174
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 137, 19

Conread position: 361-591
Cow position: chr29:35037080-35037314 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 14

Conread position: 361-598
Cow position: chr29:14190870-14190636 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 16, 91

Conread position: 362-591
Cow position: chr29:29138162-29137927 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 107

Conread position: 363-583
Cow position: chr29:27123334-27123109 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 366-592
Cow position: chr29:37465285-37465066 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 39

Conread position: 375-587
Cow position: chr29:28653187-28653396 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 124, 83

Conread position: 376-592
Cow position: chr29:36100800-36101013 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 123, 77

Conread position: 378-590
Cow position: chr29:22247559-22247345 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 91, 124

Conread position: 379-590
Cow position: chr29:15759732-15759943 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 69, 115

Conread position: 394-600
Cow position: chr29:34628271-34628054 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 109

Conread position: 413-592
Cow position: chr29:4335112-4334931 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 91, 60

Conread position: 416-598
Cow position: chr29:11799465-11799643 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 34

Conread position: 428-598
Cow position: chr29:9899935-9899758 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 148

Conread position: 430-595
Cow position: chr29:21542038-21541872 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 109

Conread position: 433-600
Cow position: chr29:18540920-18540752 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 26

Conread position: 434-591
Cow position: chr29:28950185-28950343 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 70

Conread position: 442-591
Cow position: chr29:38333910-38334063 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 450-598
Cow position: chr29:29263718-29263867 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 18

Conread position: 464-598
Cow position: chr29:798311-798174 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 77

Conread position: 465-596
Cow position: chr29:22953502-22953368 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 466-597
Cow position: chr29:18287574-18287704 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 21

Show alignments to all cow chromosomes.