Cow genome map


           Conread name:
           Ss1.1-Pig1-37B21.5
        

               Conread position:
               338-589
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               37, 117
               

               Conread position:
               348-592
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               188
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               29, 112
               

               Conread position:
               351-509
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 111
               

               Conread position:
               351-597
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 111
               

               Conread position:
               351-600
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               7, 26
               

               Conread position:
               354-557
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               355-476
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               355-547
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-563
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               22, 120
               

               Conread position:
               355-563
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               355-575
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               355-589
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               355-590
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 72
               

               Conread position:
               355-590
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 77
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               355-592
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               355-592
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               355-594
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 63
               

               Conread position:
               355-596
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               355-596
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               355-597
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               355-597
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 67
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               21, 100
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               355-600
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               22, 63
               

               Conread position:
               355-600
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               355-600
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 109
               

               Conread position:
               356-538
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               98, 16
               

               Conread position:
               356-596
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               356-600
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               357-560
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               357-585
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               357-592
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               20, 46
               

               Conread position:
               357-596
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               123, 22
               

               Conread position:
               357-597
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 88
               

               Conread position:
               358-551
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 103
               

               Conread position:
               358-580
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 40
               

               Conread position:
               359-596
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 132
               

               Conread position:
               360-598
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 41
               

               Conread position:
               361-579
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               16, 64
               

               Conread position:
               362-599
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               363-598
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               365-598
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               368-596
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               180
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               374-598
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               127, 44
               

               Conread position:
               375-577
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               129, 20
               

               Conread position:
               375-597
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               70, 128
               

               Conread position:
               375-598
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               126, 75
               

               Conread position:
               376-544
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               75, 150
               

               Conread position:
               376-591
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               14, 60
               

               Conread position:
               378-590
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               117, 156
               

               Conread position:
               379-588
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 202
               

               Conread position:
               382-592
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               133, 25
               

               Conread position:
               384-598
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               108, 74
               

               Conread position:
               384-598
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               74, 154
               

               Conread position:
               388-597
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               116, 63
               

               Conread position:
               389-599
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               398-585
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               398-593
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               398-598
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               106, 39
               

               Conread position:
               401-507
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               401-598
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 53
               

               Conread position:
               405-587
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               415-552
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 124
               

               Conread position:
               415-596
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 28
               

               Conread position:
               417-587
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               80, 131
               

               Conread position:
               417-587
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               85, 23
               

               Conread position:
               417-587
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               417-598
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               419-599
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               420-600
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               424-560
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               429-598
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               132, 137
               

               Conread position:
               440-592
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               461-598
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               462-587
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               462-598
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               463-598
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               463-600
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 102
               

               Conread position:
               464-598
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               94, 34
               

               Conread position:
               464-598
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 97
               

               Conread position:
               469-587
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               35, 0
               
Show alignments to all cow chromosomes.