Cow genome map


           Conread name:
           Ss1.1-Pig1-37B21.5
        

               Conread position:
               339-592
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               347-598
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               350-591
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               351-552
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               351-553
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               8, 137
               

               Conread position:
               351-590
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               8, 114
               

               Conread position:
               353-519
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 110
               

               Conread position:
               353-594
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               353-597
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               23, 191
               

               Conread position:
               353-600
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               35, 113
               

               Conread position:
               354-520
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 40
               

               Conread position:
               354-585
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               355-529
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               355-554
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               24, 99
               

               Conread position:
               355-560
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               355-566
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               30, 113
               

               Conread position:
               355-585
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               355-587
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-590
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 6
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               21, 105
               

               Conread position:
               355-592
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               355-593
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               355-595
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 100
               

               Conread position:
               355-596
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               22, 44
               

               Conread position:
               355-596
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               355-600
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               22, 70
               

               Conread position:
               355-600
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               356-562
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               356-563
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 39
               

               Conread position:
               356-590
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               356-591
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               356-598
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 91
               

               Conread position:
               356-600
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               148, 65
               

               Conread position:
               357-527
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               357-536
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               19, 67
               

               Conread position:
               357-581
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               18, 53
               

               Conread position:
               357-585
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               19, 84
               

               Conread position:
               358-554
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               78, 8
               

               Conread position:
               358-596
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               358-598
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               25, 67
               

               Conread position:
               358-600
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               359-515
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               116
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               361-521
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               361-600
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               363-590
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               365-507
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               10, 97
               

               Conread position:
               375-575
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               126, 65
               

               Conread position:
               375-586
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               192, 16
               

               Conread position:
               376-600
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               108, 82
               

               Conread position:
               383-587
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               119, 57
               

               Conread position:
               383-595
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               101, 70
               

               Conread position:
               385-590
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 77
               

               Conread position:
               386-553
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 150
               

               Conread position:
               390-577
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               397-596
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               104, 48
               

               Conread position:
               398-590
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               103, 55
               

               Conread position:
               398-590
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               401-586
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               105, 71
               

               Conread position:
               402-598
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               42, 157
               

               Conread position:
               407-580
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 89
               

               Conread position:
               413-585
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               413-585
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               96, 46
               

               Conread position:
               413-598
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               414-593
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               414-599
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               166, 78
               

               Conread position:
               419-593
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               420-563
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               83, 39
               

               Conread position:
               422-594
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               82, 37
               

               Conread position:
               428-592
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               462-600
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               463-595
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               463-598
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               463-598
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               32, 116
               

               Conread position:
               463-600
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 75
               

               Conread position:
               477-598
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 0
               
Show alignments to all cow chromosomes.