Cow genome map


           Conread name:
           Ss1.1-Pig1-37B21.5
        

               Conread position:
               351-590
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               7, 104
               

               Conread position:
               351-590
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               7, 115
               

               Conread position:
               351-590
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               9, 102
               

               Conread position:
               353-581
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               179
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               24, 216
               

               Conread position:
               353-590
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               24, 46
               

               Conread position:
               353-591
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               353-593
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               353-599
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               353-600
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 124
               

               Conread position:
               354-573
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               354-585
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               141, 18
               

               Conread position:
               354-592
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               354-592
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               354-600
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               355-559
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 35
               

               Conread position:
               355-560
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               355-575
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 106
               

               Conread position:
               355-576
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               149, 106
               

               Conread position:
               355-576
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               355-579
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               355-585
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               355-587
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-591
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               355-593
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               146, 65
               

               Conread position:
               355-597
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 188
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               355-598
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               356-560
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               164
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 101
               

               Conread position:
               356-598
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               357-580
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               357-587
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 54
               

               Conread position:
               357-589
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               357-597
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               357-598
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               20, 33
               

               Conread position:
               357-600
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               357-600
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               358-565
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               358-588
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 102
               

               Conread position:
               358-592
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               18, 94
               

               Conread position:
               358-598
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               359-599
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 31
               

               Conread position:
               360-575
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               361-598
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               362-560
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               363-598
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               14, 87
               

               Conread position:
               367-537
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               367-585
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               10, 85
               

               Conread position:
               375-559
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               375-587
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               375-590
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               164, 73
               

               Conread position:
               375-595
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               126, 0
               

               Conread position:
               375-597
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               382-596
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               122, 79
               

               Conread position:
               388-592
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               397-598
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               104, 56
               

               Conread position:
               413-590
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 126
               

               Conread position:
               413-596
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               419-598
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 9
               

               Conread position:
               419-598
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 141
               

               Conread position:
               421-587
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               424-587
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 6
               

               Conread position:
               428-592
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 30
               

               Conread position:
               431-591
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               432-600
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               32, 21
               

               Conread position:
               433-585
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               459-587
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               461-590
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               461-593
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               461-596
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               463-591
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               463-596
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               463-596
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               469-600
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               481-600
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               482-586
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 0
               
Show alignments to all cow chromosomes.